Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00876 ATGGCCACCATTTTAAAATCTTCAATTCAATTCCCAGCATTCAGCATCAGAACTGGGCAAAGAAGACAATCGCAGATGTCGAATTTCGCCGTCCAAGTTCTATTGGGCCGATGGTTCACCGTCTTCGCTTCTTTACTCATCATGTCCGTTTCCGCCGCCACCTACATGTTCGCACTTTACTCCTCCGATATCAAATCCTCCTTGAATTACGATCAGACCACTCTCAACCTCGTCGGCTTCTTTAAGGATCTAGGTTCCAACGTCGGAGTCTTTTCCGGTCTCATTAATGAAATTACTCCGCCTTGGGTTGTTCTCTTCATCGGTGGGGTAATGAATTTCTTTGGCTATTTCATGATTTGGCTGTCTGTCACCCACCGTATCCCCAAACCCAAATTGCCGGCAATGTGTTTGTTTATATGCCTAGGTGCAAATTCTCAGACATTTGCCAATACAGGGGCTTTGATACCTTCTGTGAAGAATTTCCCTCAGAATCGAGAAGAATTCGGCATTAGGAAAAGGAAATTGCAAGGTTTGGATGTTACTTCTTGGCTTCCGGTTCCATCAGACCAATCTCCAGCTGAATTACCATTGCCTAGACCTTCAAGTTTTCCAACGACTGATATAGCTTTAGCCAACCCAAGTTCTTGCTTCGAAAATGTGTTCAGACCGCCGGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGT 714 44.68 MATILKSSIQFPAFSIRTGQRRQSQMSNFAVQVLLGRWFTVFASLLIMSVSAATYMFALYSSDIKSSLNYDQTTLNLVGFFKDLGSNVGVFSGLINEITPPWVVLFIGGVMNFFGYFMIWLSVTHRIPKPKLPAMCLFICLGANSQTFANTGALIPSVKNFPQNREEFGIRKRKLQGLDVTSWLPVPSDQSPAELPLPRPSSFPTTDIALANPSSCFENVFRPPERGEDYTILQAIFS 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16172607 16173680 - Chy8G154810.1 Chy08g00876 232662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00876 238 PANTHER MFS TRANSPORTER 21 166 - -
Chy08g00876 238 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 202 238 - -
Chy08g00876 238 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 166 - -
Chy08g00876 238 Pfam Nodulin-like 37 166 IPR010658 -
Chy08g00876 238 PANTHER MFS TRANSPORTER 202 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00876 Chy-Chr8:16172607 Chy10g01293 Chy-Chr10:17408068 1.03E-69 dispersed
Chy08g00876 Chy-Chr8:16172607 Chy04g02032 Chy-Chr4:25945943 1.33E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00876 - - csv:101203981 318.546