Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00890 ATGGCTTCCTCTCTCTGCTTTCCCTCTCTCACTTTTCCTTCTTCTTCTCTCCACAAACGAATCCCTCTCACTCCACTAACAACCCCATTTCCATCTCTGTCCATTAAATCCTCCATTGACGAACGACGAAACCCCTCCACACCCCCCAAGCTTAAGAACCCCACCAACGCTCCAAAATCCCGTTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGCTACATTACTCTAGGGCAGGGTGATGACTCCGGTATCCCCGTTGCAACTGCCAAGCTTGATGACGTTTCTGATCTTCTTGGGGGTGCTCTGTTCCTTCCTCTTTTCAAGTGGATGAATGACTATGGACCCATTTATAGACTCGCTGCTGGCCCTAGAAATTTTGTCATTGTTAGTGATCCCACCATTGCTAAACACGTTCTTAGGAATTATGGGACTTATGCTAAAGGCCTTGTTTCTGAGGTCTCTGAGTTCTTGTTTGGCTCCGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCGTCTCTTCACAAGAAGTACTTATCAGTTATTGTTGATCGGGTATTTTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGGAAAAGGACGCATTGAATAATAATTCAGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTCTCTGTATTCAACTACAGTTTTGATTCTCTCTCTGCTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCCTATTGGAAGATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACGGTAATCAGGAAAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTGGAAGCTGAAGGTGAGCGTATCAATGAGGAGGAATATGTGAACGATGCTGATCCAAGCATCCTTCGATTTCTTCTAGCCAGTAGAGAAGAGGTCTCAAGTGTACAATTACGAGATGATCTATTGTCCATGTTGGTTGCTGGACATGAAACTACCGGTTCTGTTCTGACGTGGACACTTTATCTTTTAAGTAAGCATTCCTCATCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTCTTACAAGGAAGGCCTCCTTCCTATGAAGATACAAAGGAACTTAAATATTTGACACGTTGTATCCTCGAGTCCATGCGACTTTACCCACATCCACCGGTTTTGATAAGAAGAGCTCAAGTTGCTGACATACTCCCCGGAGATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTTTGGGAACAAGCAGAAGAGTTCATACCTGAAAGATTTGACTTGGAAGGTCCTGTGCCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGTGGTGGACCTCGAAAGTGCGTCGGTGATCAATTTGCCTTGCTTGAAGCAATCGTTGCACTTGCCATATTTCTACAGCATATGAATTTTGAGCTGGTTCCAAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAATGGTTTGTACATGAAACTTAGTCAAAGGAAGCTGACCCCAGAATTAGTTTCTTCTGCTACTTCAAGGTAA 1680 43.57 MASSLCFPSLTFPSSSLHKRIPLTPLTTPFPSLSIKSSIDERRNPSTPPKLKNPTNAPKSRSWVSPDWLTSLTRYITLGQGDDSGIPVATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVIVSDPTIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSADSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRKTVEELIAKCKEIVEAEGERINEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGDYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTPELVSSATSR* 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16316270 16321498 - Chy8G154950.1 Chy08g00890 232676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00890 559 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Chy08g00890 559 PRINTS E-class P450 group I signature 446 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS E-class P450 group I signature 343 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS E-class P450 group I signature 363 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS E-class P450 group I signature 112 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 SUPERFAMILY Cytochrome P450 101 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 Pfam Cytochrome P450 108 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 124 546 - -
Chy08g00890 559 MobiDBLite consensus disorder prediction 37 62 - -
Chy08g00890 559 Gene3D Cytochrome P450 91 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PANTHER CYTOCHROME P450 FAMILY 4 124 546 - -
Chy08g00890 559 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS P450 superfamily signature 354 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy08g00890 559 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01581 Chy-Chr6:17909013 Chy08g00890 Chy-Chr8:16316270 6.83E-162 dispersed
Chy07g01085 Chy-Chr7:15787236 Chy08g00890 Chy-Chr8:16316270 3.94E-137 dispersed
Chy08g00890 Chy-Chr8:16316270 Chy10g01070 Chy-Chr10:15842334 4.38E-43 dispersed
Chy08g00890 Chy-Chr8:16316270 Chy05g01336 Chy-Chr5:17483442 1.03E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00890 K09837 - csv:101204961 1088.94