Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00897 ATGCAGCTTCCAGTCATTGGCTTCTTGCTTCCATTCATCCTTCTACCTCTCATTTTTCCGGTCGCTATCACTGATCCTCTTGTCCCTGCACTCTGCATCTTTGGCGACTCGGTGGTCGACGTTGGAAATAACAACAATCTTCTAACAGTTGTCAAGGCTAACTTCCCTCCTTACGGAAGAGACTTTATTACGCACGCACCAACAGGAAGGTTTTGTAATGGCAAGCTTGCCACTGATATTACTGCTGAACTCCTTGGATTTTCTTCATATCCTCCTGCGTATTTGAGCCAAGATGCTACTGGAAACAAGCTTTTAACAGGAGCTAACTTTGCTTCTGCTGCTTCTGGCTTTTATGATGGCACAGCTCAGCTTTATCATGCAGTTTCATTAACTCAGCAGTTGAATTATTACAAGGAATATCAAAGCAAAGTTGTAAACATGGTGGGAACAGAGAAAGCCAATGCTATATTCTCTGGTGCAATTCATCTTCTCAGTGCAGGCAGCAGTGATTTCATTCAGAATTACTATGTTAATCCTCTTCTTTACAGAACATACTCACCACAGCAGTTCTCTGACGTTCTCATTACATCTTTTTCAAACTTCGCTCAGAACTTATATGGAATGGGAGCAAGGAGAATAGGGGTGACAGGATTACCTCCATTGGGTTGCTTGCCAGCAGCTATAACCCTCTTTGGTTCTGGCAGCAATCAGTGCATCCAAAGGTTAAATCAAGATGCCATTGCATTCAACACTAAGCTGCAAAGTGCAACTACGAGTTTGCAGAACAGATTTTCTGATCTCAAGCTTGTTGCCTTTGATATTTATCAACCTCTCTTGAATATGGTCTCAAAGCCTGCAGAAAATGGTGGAACTTCGAATGTCACAGGGTTTTTCGAGTCGAGAAGGGCTTGTTGTGGAACAGGAACAGTAGAGACCTCCTTCCTTTGCAACAATATATCAGTTGGAACCTGCTCAAATGCCAGCGGCTACGTTTTCTGGGACGGTTTCCATCCAACTGAAGCTGCAAATCAAGTATTGGCTGAGGGTTTACTCACTCAGGGATTCAGCCTCGTCTGA 1077 43.55 MQLPVIGFLLPFILLPLIFPVAITDPLVPALCIFGDSVVDVGNNNNLLTVVKANFPPYGRDFITHAPTGRFCNGKLATDITAELLGFSSYPPAYLSQDATGNKLLTGANFASAASGFYDGTAQLYHAVSLTQQLNYYKEYQSKVVNMVGTEKANAIFSGAIHLLSAGSSDFIQNYYVNPLLYRTYSPQQFSDVLITSFSNFAQNLYGMGARRIGVTGLPPLGCLPAAITLFGSGSNQCIQRLNQDAIAFNTKLQSATTSLQNRFSDLKLVAFDIYQPLLNMVSKPAENGGTSNVTGFFESRRACCGTGTVETSFLCNNISVGTCSNASGYVFWDGFHPTEAANQVLAEGLLTQGFSLV* 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16393322 16395463 + Chy8G155020.1 Chy08g00897 232683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00897 358 PANTHER GDSL-MOTIF LIPASE 9 357 - -
Chy08g00897 358 Gene3D SGNH hydrolase 24 354 IPR036514 -
Chy08g00897 358 CDD SGNH_plant_lipase_like 29 352 IPR035669 -
Chy08g00897 358 Pfam GDSL-like Lipase/Acylhydrolase 33 348 IPR001087 GO:0016788
Chy08g00897 358 PANTHER GDSL ESTERASE/LIPASE EXL3 9 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00897 Chy-Chr8:16393322 Chy02g00258 Chy-Chr2:1672308 2.24E-79 dispersed
Chy02g00551 Chy-Chr2:3314285 Chy08g00897 Chy-Chr8:16393322 8.41E-94 transposed
Chy01g01052 Chy-Chr1:11607770 Chy08g00897 Chy-Chr8:16393322 1.63E-60 transposed
Chy11g00866 Chy-Chr11:12100301 Chy08g00897 Chy-Chr8:16393322 7.86E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00897 - - csv:101206148 667.151