Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00900 ATGAAGTTCCCAGTCCTTGTAATTCCCCTCATCGCCATTTCTTGTTTTCTTGCTGTTTTAGGTCCTCGGTTCAACACCGGTTGGACCATTTTCTTTGGCAAATATGCTTCAACCCAGCCCTCTCTTTCTTCTTCCTTCAAAAGAGAGGGATTTCATTCTAATACCTCCGTTCCGGTTGCGACCGAGGAGGCCGCGGCGGCGAATGTCTCTGTTCTTTCTTTTTCTTCTCCACCGCCACCAGTGGACGACGAAAAACAAAGTCTTCAACTACACCCAAACAGGACGAGAATCAACGAAGATTTGGGAGAAACCGCGACCACCATTAATGAAGTGATCGGAAAGGTTTCTAATGAAAGTAGTTATGAATCAGCGGTGAAAGTGAGAGCAAGAAGACAGAGAGAATATACAAAATTGGAGAGAATTGAAGCAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCTAAGTTCCTTAATCAAACACAAGATCCTGACTTCGTTCCTTCTGGTCCAATGTATTGGAATTCCAAAGCATTTCACAGGAGTTACCTTGAGATGGAGAAGGAGATGAAGATCTATGTGTATGAAGAAGGAGAGCCTCCCCTGTTTCACAATGGCCCTTGCAAGAGCATTTACTCAACTGAAGGTAACTTCATCCACGCCATTGAAATGTACTCCCAATTTCGAACCAAAGATCCCAACAAGGCCCATGTATTCTTCCTACCTCTAAGTGTTGCCATGCTCGTTCGGTTCGTCTATGTTCATGACTCACATGACTTCACTCCAATACGACACACCGTCGTTGATTACATCAATGTCATTGGGACCAAATATCCGTTTTGGAATCGCTCACTCGGTGCTGATCATTTCATGCTCTCCTGCCATGATTGGGGTCCGGAAGCATCGAAGTCAGTCCCCAATCTATACAAAAACTCGATTCGAGTACTCTGTAATGCGAACACTTCCGAAGGGTTCAACCCATCGAAGGACGTATCATTCCCAGAAATCAATCTACAAACAGGCCACTTGACTGGATTTCTTGGCGGCCCATCTCCCTCCCACCGCCCAATCCTGGCCTTCTTCGCCGGTGGGCTTCACGGCCCAATAAGGCCCATTCTAATCCAACAGTGGGAGAACCAAGACCAAGACATTCAAGTCCACCAATATCTCCCCAAGGGGGTCTCTTACATTGACATGATGAGGAAGAGCAAGTTCTGCCTCTGCCCCAGTGGCTACGAAGTCGCGAGTCCTAGGATTGTCGAGGCCATTTACACCGGCTGCGTTCCCGTCCTCATTTCCAACCACTACGTCCCACCATTCAGCGACGTAATCAATTGGAAATCTTTCTCGGTTGAAGTCTCGGTCGATGATATTCCAAAGTTGAAGACGATCTTGACAGGAATTTCGACACGGCAGTACTTGAGAATGTATAGGAGAGTGGTGAAAGTTAGGAGACACTTCGAAGTGAACTCTCCGCCGAAGAGATATGATGTGTATCATATGATTTTACATTCTGTATGGCTTAGAAGACTCAATCTTAGGTTACGTTGA 1551 46.36 MKFPVLVIPLIAISCFLAVLGPRFNTGWTIFFGKYASTQPSLSSSFKREGFHSNTSVPVATEEAAAANVSVLSFSSPPPPVDDEKQSLQLHPNRTRINEDLGETATTINEVIGKVSNESSYESAVKVRARRQREYTKLERIEAGLRRARAAIREAKFLNQTQDPDFVPSGPMYWNSKAFHRSYLEMEKEMKIYVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMYSQFRTKDPNKAHVFFLPLSVAMLVRFVYVHDSHDFTPIRHTVVDYINVIGTKYPFWNRSLGADHFMLSCHDWGPEASKSVPNLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGHLTGFLGGPSPSHRPILAFFAGGLHGPIRPILIQQWENQDQDIQVHQYLPKGVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISNHYVPPFSDVINWKSFSVEVSVDDIPKLKTILTGISTRQYLRMYRRVVKVRRHFEVNSPPKRYDVYHMILHSVWLRRLNLRLR* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16405580 16408559 + Chy8G155050.1 Chy08g00900 232686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00900 516 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Chy08g00900 516 Pfam Exostosin family 187 466 IPR040911 -
Chy08g00900 516 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 206 435 - -
Chy08g00900 516 PANTHER EXOSTOSIN FAMILY PROTEIN 113 515 - -
Chy08g00900 516 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 113 515 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02045 Chy-Chr2:24639867 Chy08g00900 Chy-Chr8:16405580 4.45E-138 dispersed
Chy03g01109 Chy-Chr3:14440440 Chy08g00900 Chy-Chr8:16405580 1.44E-117 dispersed
Chy06g01592 Chy-Chr6:18175434 Chy08g00900 Chy-Chr8:16405580 2.47E-68 dispersed
Chy08g00900 Chy-Chr8:16405580 Chy09g00088 Chy-Chr9:773463 0 dispersed
Chy08g00900 Chy-Chr8:16405580 Chy05g01282 Chy-Chr5:17089950 9.01E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00900 - - csv:101205910 1009.98