Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00902 ATGGACACTAAGAACCAAGAGGAAGATCACACCGACAGCAGCGATTACACGTCCGACGACGAGGGTAGTGAAGACTACCGGCGTGGAGGTTACCACGCTGTTCGAATTGGCGATACTTTCAAGAATGGTAGATATGTGGTGCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACCGTCTGGCTCGCCTGGGACACCCAGTCCTCTGTAATTACTCTTATCTCCTTCTCATTTCTCTTTTCGCATTCATATTCTCCCTGTTCAACACGAACACACAAAACCCTTTTTCTTGTTGTTTTAATTACCTGCTTTGAATCTATGCTGAGGTATGTAGCTCTCAAAGTGCAGAAGAGTGCTCAGCACTACACTGAGGCAGCGATGGATGAGATTACAATCTTGAAACAGATTGCTGAGGGAGACCCCGATGATAAAAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGACCTAATGGGCAGCATGTTTGTATGATTTTTGAGTATTTGGGGGATAATCTGTTGACACTAATAAAGTATACTGACTACCGTGGATTACCAATTCATATGGTTAAGGAGATATGTTTTCATATATTGGTTGGCTTAGATTACTTGCATAAACAACTCTCTATTATACATACTGATTTGAAGCCTGAAAATATTTTGTTACTGTCAATGATTGACCCATCAAAGGATCCTAGAAAATCTGGTATCCCTCTCATTCTTCCAACTAACAAGGACAAGGCTACATTTGAGTCCGGGATTTCAAAAGAGATTAAATTTTCAAATGGAGATTTGACTAAACACCATAAGAGAAACATTCGAAGAAAGGCAAAGCAAGCTGCTCAGGGGTGTGTGGAGAAGGAAATGACTGCAGAGGCTGAGACTAATCCAGAAACTTCCGGTACGGTTGAATCATCTCCAAATGCAAAGTCGAGTGCAGGTGCAGCAGAGGAAAGACAATCTAGCTCTCTCAAAACAAACAGGTCATTGCATGCTGATGGTGCAAAGGGCGATGGAGAAGAAAATCAAGTTGCCAAGAAAGGGAGTCGATTGAGAAAGAAAATGTTATTGGCTTCGTTGGATCTGAATTGCAAGTTGGTTGACTTTGGAAATGCATGTTGGACATACAAACAGTTTACAAATGACATTCAGACTAGACAATATAGGTGCCCAGAAGTTATCCTTGGATCTAAGTACTCTACATCAGCAGATCTTTGGTCCTTTGCATGCATTTGTTTTGAGCTTGCAACTGGTGATGTACTCTTTGATCCTCACAGTGGAGACAACTTCGACAGAGATGAGGACCACCTAGCTTTGATGATGGAACTTCTTGGAATGATGCCGCGCAAGATTGCTTTCGGAGGTCGCTATTCTCGAGACTTCTTCAATCGATATGGAAATTTGAGGCACATCCGGAGGTTACGTTTCTGGCCATTAAACAAAGTTCTCATGGAGAAGTATGATTTCAACGAACAAGATGCAAATCAAATGGCAGAATTTCTAGTACCAATTCTTGATTTTGTTCCAGAAAACCGACCCTCTGCAGGTGAATGCCTTCTTCATCCATGGATGAATGCTGGTCCTCGGTTGTTGGAACCATCCCTGAATCCCTCGACTTCTGAGGAGAATAAGGAGAATGAAGATATGGAGGCAATGGAGGTTGGAATGAGAAAAATTGCCATTAGTTCAGATTCTGAACAAGCTAATGATTCCCAGGAGTTCAAGTCCAAGATCGGCAAAGCCAATTCCTGA 1755 42.45 MDTKNQEEDHTDSSDYTSDDEGSEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQSSVITLISFSFLFSHSYSPCSTRTHKTLFLVVLITCFESMLRYVALKVQKSAQHYTEAAMDEITILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMIFEYLGDNLLTLIKYTDYRGLPIHMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGIPLILPTNKDKATFESGISKEIKFSNGDLTKHHKRNIRRKAKQAAQGCVEKEMTAEAETNPETSGTVESSPNAKSSAGAAEERQSSSLKTNRSLHADGAKGDGEENQVAKKGSRLRKKMLLASLDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRYGNLRHIRRLRFWPLNKVLMEKYDFNEQDANQMAEFLVPILDFVPENRPSAGECLLHPWMNAGPRLLEPSLNPSTSEENKENEDMEAMEVGMRKIAISSDSEQANDSQEFKSKIGKANS* 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16419869 16422405 - Chy8G155070.1 Chy08g00902 232688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00902 584 Pfam Protein kinase domain 360 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00902 584 Pfam Protein kinase domain 109 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00902 584 MobiDBLite consensus disorder prediction 563 584 - -
Chy08g00902 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Chy08g00902 584 MobiDBLite consensus disorder prediction 266 349 - -
Chy08g00902 584 SMART serkin_6 45 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00902 584 ProSiteProfiles Protein kinase domain profile. 45 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00902 584 MobiDBLite consensus disorder prediction 1 26 - -
Chy08g00902 584 MobiDBLite consensus disorder prediction 295 330 - -
Chy08g00902 584 Gene3D Phosphorylase Kinase; domain 1 21 166 - -
Chy08g00902 584 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 579 - -
Chy08g00902 584 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 65 - -
Chy08g00902 584 Gene3D Transferase(Phosphotransferase) domain 1 167 526 - -
Chy08g00902 584 MobiDBLite consensus disorder prediction 560 584 - -
Chy08g00902 584 MobiDBLite consensus disorder prediction 332 349 - -
Chy08g00902 584 SUPERFAMILY Protein kinase-like (PK-like) 40 538 IPR011009 -
Chy08g00902 584 CDD STKc_SRPK 34 525 - -
Chy08g00902 584 PANTHER SERINE KINASE-LIKE PROTEIN 97 579 - -
Chy08g00902 584 PANTHER SERINE KINASE-LIKE PROTEIN 12 65 - -
Chy08g00902 584 MobiDBLite consensus disorder prediction 532 551 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00507 Chy-Chr2:3093961 Chy08g00902 Chy-Chr8:16419869 3.58E-160 dispersed
Chy08g00902 Chy-Chr8:16419869 Chy11g00864 Chy-Chr11:12089685 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71443 PF00069 Pkinase 1.10E-18 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00902 K08832 - csv:101206384 1073.92