Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00913 ATGGAAATGCCTGGACGGAGGTCAGATTACTCGCTTTTAAGTCAAATTCCGGACGAGGAGGTTGGAACGGGAGCTTCCACTTCTTTTTACGACTCTTTAGCAGCTGGGGGAAACGTTATTAAAGGGAGAACCGATAGAGTTTTTGATTGGGATGGGATTGGTGATCACAGGTTAAATACGCAGGCGTATCGGACAGGGAACCTGTATTCATGGATTGGTTTGCAGAGGCATTCCAGTGGAAGCAGCTACGATGATAGCTCTCTCTCTAATGATTACTACGCACCGACGCTATCAAACGCTGCAGCAAATGAGATCAATGCATTGGAATATATCCACGATGATGATTTCAGAGTGATGAAAGCTGTGGGAAGTGGAGGTTCGTCTGGAAAGAGCTGGGCCCAGCAGACGGAAGAGAGTTATCAATTGCAGCAGGCCTTGGCTCTTAGGCTTTCTTCAGAGGCTACTTGTGCTGATGATCCCAACTTTATGGATCCGATGCCAGACGAGACAGCTTTAAGATCGTTATCGATTTCAGCTGAGGCCATCTCGCATCGATTCTGGGTAAATGGATGCATTTCATATTTTGAGAAAGTGCCAGATGGTTTTTATCTAATTCATGGGATGGACCCATATGTATGGTCATTATGCACCAATCTGCAAGAGGATGGGCGCATACCATCATTGGAATCTCTGAAAACTGTTGACTCCAGCATCGGTTCATCAATTGAAGTAGTTTTGATAGATCGGCATAGTGATGCTAGCTTAAAAGAACTGCAAAACAGGGTGCATAATATTGCTTCTAGTTGTGTAACCACAAAAGAGGTTGCAGATCATTTAGCGAAGCTGGTATGCAATCACTTGGGGGGTTCAGTTTCTGAGGGAGAAGATGACTTGGTTTCTTCCTGGAAGGAATGCAGCAATGACTTAAAAGAATGTTTGGGATCTGCCGTTATTCCCTTATGCAGCTTATCTGTTGGCCTTTGCAGACATCGTGCTCTTTTATTTAAAGTCCTAGCTGATTCAATTGATTTGCCCTGTCGAATTGCTAGGGGTTGTAAATATTGCACTAGAGATGATGCTTCATCTTGCCTTGTTAGGTTCGGGCTTGATAGGGAATATCTCATTGATCTGATTGGGAGGCCAGGTTGTTTATGCGAACCTGATTCTTTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCATTGCGATTTCCAAGACTAAAACCTATTGAATCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTTGGATAGCCAATCACTTAATATTGTATTTGATGAAGCTTCTTCAGGGAATGTTGTATCTGGGAAGGATGCTGCGTTCTCTGTCTATCAAAGGCCATTAAATAGGAAGGATGGAGATGGAAAAATCATAGTGGTTACTGGTGACAAGGACAGAAATTCTCAGTTATTGAATCAAAAAGCAGCCCAACTGAATACTCAAGATGGAAAGTCTGGGCAATTTAGATCATGTGTTACTTCTCAATATAGTGTACAGTCGACCCCTTTAGTAGAAAACGTAGTCCCTTTGAGCCATATCTCACACATTGGTTCCAAAGATTCTGAGCATCTCTTAGCATTGTCTCATCCAAGGGTGGATCATGCTAACAATTTACCATTTGTTGACGGTAGTCAGTTGATTAGAAAACCAAATGAGCTTTCCCTTGGCTTAGAAGATTTGGTTATTCCATGGAAAGATCTTGATTTGAGGGAGAAAATTGGAGCAGGTTCTTTTGGGACTTTATATCATGCTGATTGGCATGGCTCAGATGTTGCTGTGAAGATTCTGATCGAACAAGACCTACATGCAGAACGTTTTGATGAATTTCTTAGGGAGGTTGCCATAATGAAATGGCTACGACATCCAAACATCGTTCTCTTTATGGGTGCAGTCACAGAGCCTCCAAACTTGTCCATTGTAACAGAATACTTATCAAGGGGTAGTTTGCACAGGCTTTTGCATAGACCTGGGGCACGTGAAGTCTTAGACGAGAGACGACGGTTAAAAATGGCATATGATGTTGCAAAGGGAATGAATTATCTTCACAAACGTAACCCCCCAATTGTTCATCGCGATTTGAAATCACCAAATCTTTTGGTTGATAAGAAGTACACTGTGAAGGTTTGTGATTTTGGGCTTTCACGCTTGAAGGTACACACATTTCTTTCGTCAAAATCAGCTGCTGGAACTCCTGAGTGGATGGCACCAGAAGTTCTCCGTGATGAGCCATCAAATGAGAAATCTGATGTTTATAGTTTTGGTGTGATACTATGGGAGCTTGCTACATTGCAGCAACCATGGGGCAACATGAACCCACCGCAGGTTGTGGCAGCTGTGGGTTTCAAAGGCAAAAGGCTTGAGATCCCATGTGATTTAAATTCTCGAGTTGCTACTATTATAGAGGCTTGCTTTGCCAGTGAGCCTTGGAAACGCCCTTCCTTTTATGAAATAATGGAATCGTTGAAGCCATTGATCAAACCTGCTACACCTCATCAAGTTCGCTCCAACGTGTCATTAGTTACTCAGTGA 2559 42.79 MEMPGRRSDYSLLSQIPDEEVGTGASTSFYDSLAAGGNVIKGRTDRVFDWDGIGDHRLNTQAYRTGNLYSWIGLQRHSSGSSYDDSSLSNDYYAPTLSNAAANEINALEYIHDDDFRVMKAVGSGGSSGKSWAQQTEESYQLQQALALRLSSEATCADDPNFMDPMPDETALRSLSISAEAISHRFWVNGCISYFEKVPDGFYLIHGMDPYVWSLCTNLQEDGRIPSLESLKTVDSSIGSSIEVVLIDRHSDASLKELQNRVHNIASSCVTTKEVADHLAKLVCNHLGGSVSEGEDDLVSSWKECSNDLKECLGSAVIPLCSLSVGLCRHRALLFKVLADSIDLPCRIARGCKYCTRDDASSCLVRFGLDREYLIDLIGRPGCLCEPDSLLNGPSSISISSPLRFPRLKPIESTIDFRSLAKQYFLDSQSLNIVFDEASSGNVVSGKDAAFSVYQRPLNRKDGDGKIIVVTGDKDRNSQLLNQKAAQLNTQDGKSGQFRSCVTSQYSVQSTPLVENVVPLSHISHIGSKDSEHLLALSHPRVDHANNLPFVDGSQLIRKPNELSLGLEDLVIPWKDLDLREKIGAGSFGTLYHADWHGSDVAVKILIEQDLHAERFDEFLREVAIMKWLRHPNIVLFMGAVTEPPNLSIVTEYLSRGSLHRLLHRPGAREVLDERRRLKMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKVHTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNMNPPQVVAAVGFKGKRLEIPCDLNSRVATIIEACFASEPWKRPSFYEIMESLKPLIKPATPHQVRSNVSLVTQ* 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16570660 16576873 + Chy8G155180.1 Chy08g00913 232699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00913 852 SUPERFAMILY Protein kinase-like (PK-like) 557 831 IPR011009 -
Chy08g00913 852 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 120 843 - -
Chy08g00913 852 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672|GO:0006468
Chy08g00913 852 Pfam Ethylene-responsive protein kinase Le-CTR1 179 385 - -
Chy08g00913 852 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
Chy08g00913 852 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 120 843 - -
Chy08g00913 852 CDD STKc_MAP3K-like 583 831 - -
Chy08g00913 852 Gene3D Transferase(Phosphotransferase) domain 1 656 845 - -
Chy08g00913 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Chy08g00913 852 SMART serkin_6 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00913 852 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Chy08g00913 852 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672|GO:0006468
Chy08g00913 852 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672|GO:0006468
Chy08g00913 852 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Chy08g00913 852 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672|GO:0006468
Chy08g00913 852 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672|GO:0006468
Chy08g00913 852 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01970 Chy08g00913 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00913 Chy-Chr8:16570660 Chy11g01573 Chy-Chr11:22290741 2.55E-95 dispersed
Chy04g00201 Chy-Chr4:1853375 Chy08g00913 Chy-Chr8:16570660 0 transposed
Chy05g00623 Chy-Chr5:7603334 Chy08g00913 Chy-Chr8:16570660 8.42E-10 transposed
Chy06g00391 Chy-Chr6:2637972 Chy08g00913 Chy-Chr8:16570660 8.47E-50 transposed
Chy07g00272 Chy-Chr7:2134058 Chy08g00913 Chy-Chr8:16570660 4.01E-27 transposed
Chy11g00919 Chy-Chr11:12566046 Chy08g00913 Chy-Chr8:16570660 1.54E-74 transposed
Chy11g01037 Chy-Chr11:14841407 Chy08g00913 Chy-Chr8:16570660 5.36E-49 transposed
Chy12g01122 Chy-Chr12:16191008 Chy08g00913 Chy-Chr8:16570660 9.24E-49 transposed
Chy12g01404 Chy-Chr12:18151135 Chy08g00913 Chy-Chr8:16570660 3.70E-36 transposed
Chy04g01970 Chy-Chr4:25583218 Chy08g00913 Chy-Chr8:16570660 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71444 PF07714 PK_Tyr_Ser-Thr 2.70E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00913 K14510 - csv:101208800 1637.85