Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00925 ATGGGCGACTTGCCCGCCGGATCTCCCTCGACCACGGTGGCGGATGACCACCATAATCTGCTTTTGGACGCCATTGGAGATGAAAAGGTAGCGAGAGAATCCAAAATATACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCCAGACTTTTGCCTGACGAAGCCACCAAGCTCTCAAATGAAGAGAGTGTGGTTTCGGTGTTTGAGAGCAGAAAGAAGAGAGTTCTGACGACAAGATCATGGGAGTTTTTGGGATTAAATCATCATTATTCCAAACGTAACCCATTAATCGAGTCTAATCTCATTGTTGCCGTTTTTGATACGGGGATTTGGATAGACAGTCCTAGTTTCAGCGATGAAGGTTATGGTCCACCTCCCCCTAAATGGAAGGGCAAATGTGTCACTGGACCCAACTTCACTGCCTGCAACAACAAAGTGATCGGTGCCAATTACTTCGATCTAGACAAAGTAACCTCATACCCGGAGTTGAGCGTTGCGGACACGGAGGGCCATGGTTCTCACATCGCCTCCACTGTGGCCGGTTCCGCGGTGGCGGGTGCAAGCTTGTACGGTCTCGCCAAAGGAACTGCGCGCGGAGGCGTGCCTTCAGCTCGGATTGCAGTCTACAAAGTGTGCTGGAGTGTTTTCTGCAACGAAATGGACGTTCTTGCTGCCTTCGATGAGGCCATCGCTGACGGCGTCGATTTAATTTCAGTCTCCATAGGTTCCCCGCCGATGGATTTCTTCAGGGACGGCCAGGCGATTGGGGCTTTTCATGCCATGAAGAAGGGGATTTTGACAACCACCGCGGCCGGCAACGACGGCCCTGAATTGTCCACCGTGGAGAATGTGGCGCCGTGGATTATGACCGTGGCTGCAACGGCCATTGATAGAGGATTCGTCACCGCTTTCGAACTCGGTAATGGCAATAAATTTACTGGAGGTTCCATCAACACTTTCTCTCCACATAAACAAATGTACTCTCTTACAAGCGGGGCCAAAGCCGCCTTCAACAATGGCATACCCCATCAAGGAAATGCAAGTGCTTGTGATCCAAATGCTATAAACCAAAGCAAGGTGAAGGGAAAGATTGTATATTGCTTGAAAACTTATACAGATCCCTCCATCAAATCCTTAGGAGGCACTGGAGTCCTTCAACTCACTCAACAACAAACCGATTATTCCTCTATTTTGCTTCTTCCTGGGGCTACCATCCCTTCTGTTTCTGGCAAATACATTGATCTTTATATCAATTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTGAAACTGTCAAAATTGATGCTCCCTTTGTTGCTTCTTTCTCTTCTAGAGGGCCTCAGCGTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTAGCAACTTTGACAGGAGATACGTCAGACAGTAGATATAGTTTTTTCACTGTAATGTCAGGTACATCCATGGCATGTCCTCATGCCACGGCAGCTGCAGCGTATGTTAAGTCATTTCACCCTGACTGGTCTCCGGCTGCAGTAAAGTCTGCTCTCATGACCACTGCAACCCCAATGAAGATCAAATCTGAAGACGTTGTGCTCGGCTCTGGAGCAGGACAAATAAATCCAACTAAGGCAGTGCATCCAGGCCTTGTTTATAATATCTCGTTTGACTCCTACATCTCATTCCTCTGCAAAGAAGGCTACAATAGCACAACAATTGGCCTACTTGGTGGTAGCAAAAAGTATAATTGCTCCAAAATGAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTAGTTCTGCCATTGAGGCGGTCTTTTATCGAACAGTAACTCATGTTGGGTATGGTGCATCGTTGTACAGGGCAAATATATCATCCCCAGATAGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACAAGGACGTTTAAAGTTGTAGTGAAAGGCAAACCTATGCCAAAAGGAACACAGATTCTATCAGCTTTACTTGAATGGACCGATTCTAAACACATAGTTAGAAGCAATATTCTTATCTACAGGGGACTGATCTAA 2127 46.4 MGDLPAGSPSTTVADDHHNLLLDAIGDEKVARESKIYSYGKSFNGFAARLLPDEATKLSNEESVVSVFESRKKRVLTTRSWEFLGLNHHYSKRNPLIESNLIVAVFDTGIWIDSPSFSDEGYGPPPPKWKGKCVTGPNFTACNNKVIGANYFDLDKVTSYPELSVADTEGHGSHIASTVAGSAVAGASLYGLAKGTARGGVPSARIAVYKVCWSVFCNEMDVLAAFDEAIADGVDLISVSIGSPPMDFFRDGQAIGAFHAMKKGILTTTAAGNDGPELSTVENVAPWIMTVAATAIDRGFVTAFELGNGNKFTGGSINTFSPHKQMYSLTSGAKAAFNNGIPHQGNASACDPNAINQSKVKGKIVYCLKTYTDPSIKSLGGTGVLQLTQQQTDYSSILLLPGATIPSVSGKYIDLYINSTKNPKAVIYKSETVKIDAPFVASFSSRGPQRISSNILKPDLSAPGIDILAAYTKLATLTGDTSDSRYSFFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSEDVVLGSGAGQINPTKAVHPGLVYNISFDSYISFLCKEGYNSTTIGLLGGSKKYNCSKMKPAQGTDGLNYPTMHKQLSDPSSAIEAVFYRTVTHVGYGASLYRANISSPDSLSVKVFPDTLNFVKLHETRTFKVVVKGKPMPKGTQILSALLEWTDSKHIVRSNILIYRGLI* 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16668331 16674095 - Chy8G155300.1 Chy08g00925 232711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00925 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 494 504 IPR023828 -
Chy08g00925 708 Gene3D - 571 705 - -
Chy08g00925 708 SUPERFAMILY Subtilisin-like 90 554 IPR036852 GO:0004252|GO:0006508
Chy08g00925 708 CDD PA_subtilisin_like 306 427 - -
Chy08g00925 708 Gene3D Peptidase S8/S53 domain 101 567 IPR036852 GO:0004252|GO:0006508
Chy08g00925 708 ProSiteProfiles Serine proteases, subtilase domain profile. 80 554 - -
Chy08g00925 708 Pfam Fibronectin type-III domain 604 703 IPR041469 -
Chy08g00925 708 ProSitePatterns Serine proteases, subtilase family, histidine active site. 171 181 IPR022398 -
Chy08g00925 708 Pfam Subtilase family 99 538 IPR000209 GO:0006508|GO:0008236
Chy08g00925 708 CDD Peptidases_S8_3 77 530 IPR034197 -
Chy08g00925 708 Gene3D - 297 433 - -
Chy08g00925 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Chy08g00925 708 PANTHER CUCUMISIN PROTEIN 10 705 - -
Chy08g00925 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 705 IPR045051 -
Chy08g00925 708 Pfam Peptidase inhibitor I9 12 72 IPR010259 -
Chy08g00925 708 PRINTS Subtilisin serine protease family (S8) signature 493 509 IPR015500 -
Chy08g00925 708 PRINTS Subtilisin serine protease family (S8) signature 98 117 IPR015500 -
Chy08g00925 708 PRINTS Subtilisin serine protease family (S8) signature 167 180 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00925 Chy-Chr8:16668331 Chy10g00497 Chy-Chr10:11342656 0 dispersed
Chy10g00140 Chy-Chr10:3741427 Chy08g00925 Chy-Chr8:16668331 0 transposed
Chy04g01945 Chy-Chr4:25351439 Chy08g00925 Chy-Chr8:16668331 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00925 - - csv:101207592 1347.41