Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00976 ATGGGAGTTCCACAGGCCATGGAAATTCTCACCGAGAGAGCCGCACTTGTTCGAGAGTCGCTTCAGAAGAGCCAGAATGTCACCGAGAACATGGTCTCCATTCTCGGCTCCTTCGACTACCGTCTCTCCGCCCTCGAAACCGCAATGCGCCCTACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAGAATATTGACAAGACATTGAAGGCTGCAGAAAGTATGCTGGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGACCACATGAGGACTTAGAGATGTACTTGGAAGCAATTGATCAATTACGAAGCACAAATCGCTACTTTACTGGGAACAAAAATTTCAAAAGTAACGAAGCTATTCTTATCCACACAAGCAACTTGCTTGTTAAAGCCATTTCAAAGCTAGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCTGATCGTCTATTTGATTGCCTCCCCAACAATTTGCGTCCATCGTCAGCATCTGCACACCATGGTGATAGTGGTAGCAAAATTAACTCTGACCAACACAACAAAAGCTTAGAAGCTGCCGTCTTCATTCCACCAACTCTAATCCCACCCAGGGTTCTTCCATTGTTGCATGACTTGGCTCAACAAATGATTCAGGCTGGTCATCAGCAGCAGCTGTTTAGAATATATAGGGATACTCGCGCTTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTACCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAATTGCTGTTTGCTGGGGAAAGGAAAATCTGTGATCAAATTTTTGACGGTGCAGACTCTCTCCAAGATCAATGCTTCGCTGATGTGACTTCAAACAGTGTGTCAGTGCTACTAAGTTTTGGAGAGGCCATTGCCAGAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTATGAAATAATGCGAGAACTGCAGTCTGAGATTGAAACACTTTTTGGAAGTAAAGCATGTATTGAAATGCGGGATTCTGCATTGAGCTTAACCACACGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACGGCAGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAATTACGTCAAGTTTCTGTTTGACTACCAATCTACTTTGAAGCAGCTATTCCAAGATTTTGACGCTAGTGATCCAGATGCTCAGATAGCAGTGGTAACTACAAGAATCATGCAGGCCCTTCAGACTAATCTTGATGGGAAATCTAAACAATATAGGGATCCTGCACTAACTCAATTATTTCTTATGAACAATATTCACTATATAGTGAGATCCGTTCGAAGATCGGAGGCAAAGGATTTGCTGGGTGATGACTGGGTGCAGATACATCGACGGGTTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACAGTTCAGGCCTCAGGTAGTGGTGGTGGTTCGGGAGATGCTAGCAGTGGACTTTCAAGAGCTATGGTGAAAGATAGGTTCAAGACTTTTAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAGTGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTAAGGTTGGCAGTTGCTGAAGTTTTATTGCCTGCCTACCGATCCTTCATCAAGCGTTTCGGCAGGCCTATGATTGAGAATGGGAAAAATCCTCAAAAATACATCAGATATTCACCCGAGGATCTCGAGCGTATGCTAAATGAATTTTTTGAGGGCAAGACATTCAGTGAGCAAAAGCGTTAG 1920 43.75 MGVPQAMEILTERAALVRESLQKSQNVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRYFTGNKNFKSNEAILIHTSNLLVKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNNLRPSSASAHHGDSGSKINSDQHNKSLEAAVFIPPTLIPPRVLPLLHDLAQQMIQAGHQQQLFRIYRDTRASVLEQSLRKLGVERLTKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFDGADSLQDQCFADVTSNSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMRELQSEIETLFGSKACIEMRDSALSLTTRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDFDASDPDAQIAVVTTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRVVQQHANQYKRISWAKILQCLTVQASGSGGGSGDASSGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGRPMIENGKNPQKYIRYSPEDLERMLNEFFEGKTFSEQKR* 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17024699 17031962 - Chy8G155810.1 Chy08g00976 232762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00976 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 636 - -
Chy08g00976 639 Pfam Exo70 exocyst complex subunit 273 627 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy08g00976 639 SUPERFAMILY Cullin repeat-like 76 630 IPR016159 -
Chy08g00976 639 Gene3D Exocyst complex component Exo70 75 639 - -
Chy08g00976 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 636 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01600 Chy-Chr3:17959302 Chy08g00976 Chy-Chr8:17024699 2.23E-44 dispersed
Chy08g00976 Chy-Chr8:17024699 Chy10g01231 Chy-Chr10:16950412 0 dispersed
Chy10g01232 Chy-Chr10:16959372 Chy08g00976 Chy-Chr8:17024699 5.73E-40 dispersed
Chy08g00976 Chy-Chr8:17024699 Chy12g00132 Chy-Chr12:1479268 2.64E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00976 K07195 - csv:105436019 1217.22