Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g00997 ATGGAAGTTAACAACAATTCAAGAACACCACCACCAAGAACCCACTTCCATAACCACAACAATTCCAAATCCCACCAACATTTCCACACTCACAATGCCATTCTCAGCTCAAATTCCATCCTCATTATCATTGCTTCAATCATTTCCATCACCATTCTCCTTGCCATTTTCCTCCTTATCTTCATGCTCCTTCGCCTCAAATCTGCTCGAAACACTGCCACTGCTACCTCCGCCTCCTCCGCCACCACACAATCCACCACATTCATCATCCCTCACACAACCATCAATTTTGATTCAAGCCCAGAAGTTAAAGGGGGAGGGTGCTTATATGGAGGAAACTCTGGGAGAATTCCTCAGTACAGAATCAGGGGAGTTCAAGTTTTCACTTATAAGGAACTGGAATTGGCTACTGATAATTTTAGTGAAGCAAATGTTATTGGAAATGGAAGATTAGGGTTTGTGTATAGAGGAGTTCTTGCAGATGGAGCTGTTGTTGCCATTAAAATGTTTCATAGAGATGGCAAACAGAGGGAACGTTCTTTCAGAATGGAGGTGGATCTCCTAAGCCGCTTGCACTCTCGTTGTTTGGTGGAGTTGCTTGGCTACTGTGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGCACTCTTCATCATCATCTACATAATCCCAACAGCGAATCTCAGCCATTGGATTGGAATACTAGATTGAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTTCTCCATGAGCATGCTGTTCCATCTGTTATTCATAGAAACTTCAAGTGTACCAATGTTCTACTGGATCAGGATTTGCGAGCTAAGGTGTCAGATTTCGGTTCGGCCAAGATGGGCTCTGACAAGATCAATGGTCAGATATCCACACAAGTCCTGGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACCGGAAAACTCACAACAAAGTCAGATGTGTACAGCTTTGGTGTCGTGCTGCTAGAGCTATTGACTGGTCGAGTGCCGGTCGATATCAAGAGACCGCAGGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTGACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAGCTATTCAAGGGAAGTACTCAAAAAAGGATCTAATTCAGGTAGCAGCCATTGCAGCCATGTGTGTGCAGCCCGAAGCTGACTACCGGCCTTTGATGACCGATGTCGTGCAGTCACTGGTTCCTCTAGTTAAGAACCCATCGCCGTCGTATCGATTCTTCAATTGA 1287 44.99 MEVNNNSRTPPPRTHFHNHNNSKSHQHFHTHNAILSSNSILIIIASIISITILLAIFLLIFMLLRLKSARNTATATSASSATTQSTTFIIPHTTINFDSSPEVKGGGCLYGGNSGRIPQYRIRGVQVFTYKELELATDNFSEANVIGNGRLGFVYRGVLADGAVVAIKMFHRDGKQRERSFRMEVDLLSRLHSRCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESQPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDLRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSFGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSPSYRFFN* 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17220308 17223375 - Chy8G156020.1 Chy08g00997 232783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g00997 428 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 13 422 - -
Chy08g00997 428 MobiDBLite consensus disorder prediction 1 27 - -
Chy08g00997 428 MobiDBLite consensus disorder prediction 1 17 - -
Chy08g00997 428 Gene3D Phosphorylase Kinase; domain 1 113 215 - -
Chy08g00997 428 Pfam Protein tyrosine and serine/threonine kinase 144 413 IPR001245 GO:0004672|GO:0006468
Chy08g00997 428 Gene3D Transferase(Phosphotransferase) domain 1 216 422 - -
Chy08g00997 428 PANTHER OS01G0750732 PROTEIN 13 422 - -
Chy08g00997 428 SUPERFAMILY Protein kinase-like (PK-like) 118 413 IPR011009 -
Chy08g00997 428 ProSiteProfiles Protein kinase domain profile. 140 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy08g00997 428 CDD STKc_IRAK 146 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01953 Chy-Chr1:24733095 Chy08g00997 Chy-Chr8:17220308 6.71E-94 dispersed
Chy03g01097 Chy-Chr3:14355904 Chy08g00997 Chy-Chr8:17220308 3.08E-93 dispersed
Chy08g00997 Chy-Chr8:17220308 Chy12g00836 Chy-Chr12:13639375 9.47E-145 dispersed
Chy08g00997 Chy-Chr8:17220308 Chy02g01226 Chy-Chr2:8870818 9.21E-99 transposed
Chy08g00997 Chy-Chr8:17220308 Chy04g00919 Chy-Chr4:13055727 7.87E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71446 PF07714 PK_Tyr_Ser-Thr 1.70E-43 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g00997 - - csv:101210578 777.319