Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g01021 ATGATTGTTGTCTTCATTTCGATGCCTTTTTCATTGGAGAAATCTCACATTTTGATTGCTAATTCACTGTTGGATGCAACTGAGAGCTTTAATGTTAAAGAGCTAGAGAGAGTTTCAGGGGAAGATGAGAATGGCGGCAATGAGCCTTTCATTTTGGAGAGAGTCAGAGCTCTACTTGGACTTAATAGCTTACAATTGGGAAATCAAAGCCCATCAGATCTTTCGCCTTCGCCATCTCCGTCGCCCTCGCCATCGCCAGTCACCATTTCTCCTTCTCCTGCTCCAATGGCAGCTCATCGAGTGCACATTCATGAGCATTCTCATCCTCATCAGCTGCGCTTGCACAAGAGCCGACCAAAATACAAACCGAAAAGAAAAGATCCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTGTAGGAGTCGCCATTTTGTTGTGCTCTATTATTGCCTTTTGGGTGTGCAAGAAGTTCAAAAGTCAGAGAGAGGAATCCATGGAGAAGCTTTCTGTTAAGAGTGAAAAAGAAGATAAGACAGCAAGACCAAAATCTAGCCTTGATCTGTTCGATCTTGGTATAGTAGGTATGGATGTTGAAGAACAGACTCATACTTCTGAAAGTGAAAAGGAGTTATCTGTTCATAAAGAGGGGGGAAGGAGTGAAGAGATGTTGGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAATGATGCATGTTCATGAGGAAGATGATAGTAAATCAATACAATTTGTATCTGAGGGAACTCATTCCTCATCTGGGGATAAGGTTACTCCTGTTCAATGTTGTTCATCTGATGATGAGGAATCATTCCATTCTTGTGGTGATTCCAATTTGTCAAATCGTCGCCTTTCAAATGCTTCGGAAATTTCTTCTGCTAATGTGATAACAAATTCTACTTGTTCAGTACCAACTGTCACCTTAGCAAGTAAATTGGAAACACAATGTGATGAATCTAACAAGTTATTAACTTCTGACCAGTCTCATCTTGCCCTTTTTCCTTGTAATTCAGAACCCAAAATGCAGATGGTTCCCCATTCTGTTGGTTTCCAAAAGAATGTCAATGTCCCATCTTTATCTCCACCTCCACCTCCACCACCGCCACCGCCTCCTCCTCCTGCCGTCACGGATCGCTGTTCGTTTTCCCTTTCTTCACCCTTTTCAACTGGATCTACTTCTTCTTCTGCATTATTAAGATCCTCATCTCCGGCATTGTCAGATTCTTCTTCCGTATCTCCTATACCATGGAATGATCTGCCATCACCTCAAACCACTACTAAACCTTCATTACCATCATCTGCTATTCCTCCACCCCCTTCTCCACCACCAATTTTGAAAACAAGCCCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGTCATTTGGAAAAGAGGCAAATTTAAGGCCAAAACTTAAGCCTCTCCATTGGGACAAAGTAAGAGCTGCACCTGATCAATCCATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCATTATTTGGTTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGTCCTTCTCCAAGCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATTCTCTTAAAAGCCTTAAATCTCTCCACAGAACAAGTTTGTGAAGCCATAGAACAAGGGAATGGGCTGCGTTTGAGACAACTTGAAGCACTGGTGAAGATGGTACCAACACAAGAAGAAGAAGCCAAATTGTTAAGCTATGAAGGAGACATTGGTGAATTGGGTTGTACAGAGAAGTTTGTCATAGCAATTCTGAGAATACCATTTGCCTTCCAAAGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCAGGAACTCATTTTCCATACTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGACTCTTCCTAAAACTACTAGAAGCCGTGTTAAAAACAGGAAACCGAATGAACGTCGGAACAAGTAGAGGAGGCGCACGAGCATTCAAACTCGACGCTCTCCTAAAACTCTCCGACGTCAAAGGCACAGACGGCAAAACATCCCTACTCCACTTCGTAGTACAAGAAATGATCCGGTCAGAAGGGATCAGAGTATCAGGCAGCATAATGGGGAAAATCAACCAAAAAAACAAACCAAGAACAGTGGAAGAACGAGAAAACGATTACCGAAGAATGGGATTGGATTTGGTGTCGGGGTTGAGCACGGAACTGCAGAACGTGAAACGAGCGGCAACGATCGACCTGAAAGTAGTGGGGAGTTCAAGGGGGAATTTGAATGAGGGAATGAGGAAAATGGAGGAATTGGTAGGGAAGGAGTTGAGAGGGAACTTTGTGGAAAGCATGAAAGGGTTTGTGGGGTATGTGAAGAAGAGGATGGAGGAAGTGAAGAAGGATGAAGAAAGAGTAATGGGGAATGTGAGAGAGATTACAGAGTATTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCATTGAGGATTTTTGTGATCGTTAGAGATTTTCTTGGAATGTTAGATAATGTTTGTAAAAGCTTCAAGATTGGTTGTTGA 2658 42.21 MIVVFISMPFSLEKSHILIANSLLDATESFNVKELERVSGEDENGGNEPFILERVRALLGLNSLQLGNQSPSDLSPSPSPSPSPSPVTISPSPAPMAAHRVHIHEHSHPHQLRLHKSRPKYKPKRKDPREGRVRKILVAVLVSVGVAILLCSIIAFWVCKKFKSQREESMEKLSVKSEKEDKTARPKSSLDLFDLGIVGMDVEEQTHTSESEKELSVHKEGGRSEEMLDSEFDNVSVSSTKEMMHVHEEDDSKSIQFVSEGTHSSSGDKVTPVQCCSSDDEESFHSCGDSNLSNRRLSNASEISSANVITNSTCSVPTVTLASKLETQCDESNKLLTSDQSHLALFPCNSEPKMQMVPHSVGFQKNVNVPSLSPPPPPPPPPPPPPAVTDRCSFSLSSPFSTGSTSSSALLRSSSPALSDSSSVSPIPWNDLPSPQTTTKPSLPSSAIPPPPSPPPILKTSPYSFKTPPPPPSKLPQFMSFGKEANLRPKLKPLHWDKVRAAPDQSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGNGLRLRQLEALVKMVPTQEEEAKLLSYEGDIGELGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSILEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKINQKNKPRTVEERENDYRRMGLDLVSGLSTELQNVKRAATIDLKVVGSSRGNLNEGMRKMEELVGKELRGNFVESMKGFVGYVKKRMEEVKKDEERVMGNVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGC* 886
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17390620 17393827 - Chy8G156260.1 Chy08g01021 232807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g01021 885 MobiDBLite consensus disorder prediction 444 476 - -
Chy08g01021 885 MobiDBLite consensus disorder prediction 365 479 - -
Chy08g01021 885 MobiDBLite consensus disorder prediction 103 123 - -
Chy08g01021 885 PANTHER FORMIN-RELATED 34 303 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Chy08g01021 885 MobiDBLite consensus disorder prediction 75 91 - -
Chy08g01021 885 MobiDBLite consensus disorder prediction 370 389 - -
Chy08g01021 885 Pfam Formin Homology 2 Domain 483 874 IPR015425 -
Chy08g01021 885 MobiDBLite consensus disorder prediction 204 231 - -
Chy08g01021 885 PANTHER FORMIN-RELATED 360 882 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Chy08g01021 885 SMART it6_source 481 883 IPR015425 -
Chy08g01021 885 MobiDBLite consensus disorder prediction 205 230 - -
Chy08g01021 885 Coils Coil 642 662 - -
Chy08g01021 885 Gene3D Formin, FH2 domain 477 882 IPR042201 -
Chy08g01021 885 PANTHER FORMIN-LIKE PROTEIN 360 882 - -
Chy08g01021 885 MobiDBLite consensus disorder prediction 391 443 - -
Chy08g01021 885 ProSiteProfiles Formin homology-2 (FH2) domain profile. 481 885 IPR015425 -
Chy08g01021 885 PANTHER FORMIN-LIKE PROTEIN 34 303 - -
Chy08g01021 885 MobiDBLite consensus disorder prediction 69 129 - -
Chy08g01021 885 SUPERFAMILY Formin homology 2 domain (FH2 domain) 494 879 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g01021 Chy-Chr8:17390620 Chy11g00235 Chy-Chr11:2211403 1.73E-129 dispersed
Chy08g01021 Chy-Chr8:17390620 Chy07g00331 Chy-Chr7:2686037 5.36E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g01021 - - csv:101208374 1524.61