Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g01062 ATGAGTCAGACAGAAGTATCAAGGATAAAGACCCCTCTCGTTCCACTCGCTACTTTGATCGGTCGCGAGTTGAGGAACGAGAAGGTTGAGAAACCATTTGTGAAGTATGGACAGGCTGCTTTGGCTAAGAAAGGAGAGGACTACTTTCTGATCAAACCTGACTGCCAGCGTATTCCTGGGAACCCTTCCACTGCATTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCCGCTATTTTTGCAAAGGAACATTTATTGGAAAATGTCCTAAGTGCAATTCCTCAAGGGGCCAATAGAGAAAAATGGCTTCAGGCTCTTCCCCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGACGGGTGGACTGTTACTGTTGCTTCTGTGGGAGATTCACGGTGCATATTAGACACCCAAGGGGGTGTTGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAATGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTTGGTCCTCTTCGCTGCTGGCCTGGTGGCTTATGTCTCTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATCGTCCCAATACCACATGTTAAACAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTAATTATTGCTTCTGATGGTATTTGGGATGCATTATCGTCTGAAATGGCTGCAAAGTCTTGCCGGGGATTACCTGCAGAGCTTGCTGCCAAGCTGGTTGTGAAGGAAGCTTTACGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATCCCATCTGAGCAACCTATTTTATTACCATCAACTCCAAGGAAGAAGCAAAATGTGCTCACCTCATTCTTTGGGAAGAAATATCCAAACTCTTTGGGTAAATCTGCTAACAAACTTTCAGCTGTTGGTGTTGTAGAGGAATTGTTTGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCTTCAGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCCGATCAACCCCCAAACGAAAATTTGTCGATGAACTCAGGACCTTTCTTTTCACCATCATCGAAGCCATGGGAAGGTCCATTCCTCTGTGCAACTTGTCGAAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAATAAAACCGACAATAACCGTTTAG 1287 44.37 MSQTEVSRIKTPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLENVLSAIPQGANREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPSTPRKKQNVLTSFFGKKYPNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKPTITV* 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17744725 17747519 + Chy8G156670.1 Chy08g01062 232848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g01062 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Chy08g01062 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Chy08g01062 428 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Chy08g01062 428 CDD PP2Cc 43 297 IPR001932 -
Chy08g01062 428 SMART PP2C_4 23 295 IPR001932 -
Chy08g01062 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Chy08g01062 428 Gene3D - 37 302 IPR036457 -
Chy08g01062 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 427 - -
Chy08g01062 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g01062 Chy-Chr8:17744725 Chy10g01167 Chy-Chr10:16522126 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g01062 - - csv:101219622 850.506