Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g01076 ATGGTTTGTGAAGAAGAAACTCTAATCCAAAAGGTTTGTGAATTATATGATGAAATCTCAAGCCTTGAAAGCCTCAAACCTTGTAACAATGTCGACACTCTTTTCACTAAGTTGGTGGTCACGTGCATGTCACCCACCTCCCCTCATTTCCATATCAATTCACTCTCAAAACCACTTCAACAGATGAGATCAAATCTCATTCGTCTCTGTGGTCAAGCTGAGTCTCTTTTAGAGTTTCATTTTTCTGATTTATTGGCCAAATTTGATTCCCCTATCGACCATCTTCATGTCTTCCCTTACTTCTCTAATTACATTAAACTTAGCCTCCTTGAATTCTCTATTCTCCGCTCCCATGGCCCCCTCGCGCTTCCCTCCGCCGTTGCATTCGTTGGCTCTGGCCCTCTTCCTCTTACCTCCGTCGTCCTTGCCACTCGCCACCTCACCTCCACCATCTTCCACAACTACGACCTCGACCCGGTTGCTAATTCAAAGGCATCGAACTTGATGTCGCGTGACCCCGACCTGAAGACAAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACAGAGGAGCTAAAACAGTATGAGGTTGTGTTTTTGGCAGCTCTGGTAGGAATGGAGAAGGAGGAAAAACTAAAGGTGATCAAGCATTTGTCAGAGTACATGTCAGAAGGAGCTTATTTGATGATTAGTAGTGGTATTGATCATAAGAAGGATAATAATGGTGTTGTTCATAATAACAAATGTTCTGAGATCCAAAACGGCTTCAATAATCATGGAGGATATACTCTTTTAAAGTGTTTATTATTTAGGAACTTCGTAATTCTACATGAAGATAGAAGCTTAACCAACTTCAATTCTAAAGTAATTAACTCTTTCCACTTAAATTATCCGAAAAATCCCAAATTACCCAACGAACTTTCCAACGGTTAA 936 41.35 MVCEEETLIQKVCELYDEISSLESLKPCNNVDTLFTKLVVTCMSPTSPHFHINSLSKPLQQMRSNLIRLCGQAESLLEFHFSDLLAKFDSPIDHLHVFPYFSNYIKLSLLEFSILRSHGPLALPSAVAFVGSGPLPLTSVVLATRHLTSTIFHNYDLDPVANSKASNLMSRDPDLKTRMVFHTCDIMKVTEELKQYEVVFLAALVGMEKEEKLKVIKHLSEYMSEGAYLMISSGIDHKKDNNGVVHNNKCSEIQNGFNNHGGYTLLKCLLFRNFVILHEDRSLTNFNSKVINSFHLNYPKNPKLPNELSNG* 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17916883 17920833 + Chy8G156810.1 Chy08g01076 232862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g01076 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 304 IPR004298 GO:0030410|GO:0030418
Chy08g01076 311 PANTHER NICOTIANAMINE SYNTHASE 3 4 235 IPR004298 GO:0030410|GO:0030418
Chy08g01076 311 Pfam Nicotianamine synthase protein 5 233 IPR004298 GO:0030410|GO:0030418
Chy08g01076 311 Gene3D Vaccinia Virus protein VP39 6 238 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g01038 Chy08g01076 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01039 Chy-Chr5:14996651 Chy08g01076 Chy-Chr8:17916883 9.66E-83 dispersed
Chy05g01038 Chy-Chr5:14979736 Chy08g01076 Chy-Chr8:17916883 2.81E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g01076 K05953 - csv:101218907 454.136