Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy08g01082 ATGTCCAAGCTTCTGCTCCTTCTTTTTCTCATACCACTTACTTTTACCAAATGGGTTCATGCCTTTCACCTCTATAACCTCTCTGATTCTTCTCTCTTCGATTCTTACCAAACCTCCTTCGCTGCGACCCTTAATCCTCTCATCGTCCCTCTCACTCTCATTCATGGAGCTGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACAGGAATTCTAAGTAATAGAGCTGAAGACAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCTATGGAAGCATTGAAGGCCGAGGGAATGCGGTTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTCAGAGAATTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGGTTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTTTATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGGCAGCAGGAAGAAATTTGCCATCCTTTTGTATGAGCCATCTTGATCCAACTTCGTGCTTCTTCCCACAAAATGTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCAGCATACGATTCCTGGCAGATACAATCCAGTTTAGCCCCACCTTCCCTAGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCGAAATGTAGCCAACCCCAGATTCAATTTCTTCAAGGATTCAGAAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTGAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTTGGCGACAATTCTCCTGTCATTGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGAACGAGCAGCAGTGAAAGCAATTGATTGTCCCTATCCTTGTGACAGGACGTGCCACCATCTGGTTTTTAGAAGCGGTTAG 1245 43.53 MSKLLLLLFLIPLTFTKWVHAFHLYNLSDSSLFDSYQTSFAATLNPLIVPLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEDNPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALKAEGMRFAKQALLSGCSAGGLASILHCDEFRELFPRTTKVKCLSDAGLFLDVADISGGHFIRNLFGGVVGLQAAGRNLPSFCMSHLDPTSCFFPQNVIAGIRTPLFLVNAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCSQPQIQFLQGFRNQMLNAVSDFSKSSENGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFERAAVKAIDCPYPCDRTCHHLVFRSG* 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17979138 17984093 - Chy8G156870.1 Chy08g01082 232868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy08g01082 414 Pfam Pectinacetylesterase 46 391 IPR004963 GO:0016787
Chy08g01082 414 PANTHER PECTIN ACETYLESTERASE 2 47 412 - -
Chy08g01082 414 PANTHER NOTUM-RELATED 47 412 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00952 Chy-Chr6:6988965 Chy08g01082 Chy-Chr8:17979138 1.18E-142 dispersed
Chy07g01106 Chy-Chr7:16004743 Chy08g01082 Chy-Chr8:17979138 1.68E-155 dispersed
Chy08g00755 Chy-Chr8:15257468 Chy08g01082 Chy-Chr8:17979138 9.00E-145 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy08g01082 K19882 - csv:101218273 857.825