Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00009 ATGAAGGAAGAGTATGGTCGACACGAGGGTTTCACCCAATTGTCCCTCTCTGCTTCTAATAAATTACGACGGGGATGGATGAGTTTCATTTCAAATTTCGATTCCCAATTCCCGTATATGGATGATTCGCTGATCTTAAACGACGCTGCCCCGGACAACCGGCGATCACAGTCGGGAGGGTGGAGAGCGGCGGGGGTGATAATTGGGGTTGAAATTGCGGAGCGGTTCGCATTCTTCGGGATAAGCACCAATCTGGTAAGCTACTTGACGGTGGAGATGGGACAGTCCATGGCCGACGCGGCCCAGAATGTAAATCTGTGGATTGGAACCGCTTCTTTGCTCCCACTGCTTGCCGCCTCTTTCGCCGATTCCTTCCTCGGACGCTACCTTACAATTATCCTCGCCTCCGCTCTTTACATCCTGGGACTTGGCCTGCTCACACTCTCAGCTATGCTTGCTTCACCAAGCAGTTTCCAGCGTTCTGGCTCTGCTGCCTCGGGAGCTTCATCGCGGCCTGTTCTCCATCTCGTGTTCTTCTTCACCTCTTTGTACTTGGTTGCATTTGCACAAGGTGGTCACAAGCCTTGTCTTCAGGCATTTGGTTGTGATCAATTTGATGGAGAAGATCCTCAAGAATGCATAGCCAAATGCTCCTTCTTCAACTGGTGGTACTTTTCCACTACTCTTGGATCCTTCATTGCTCTCATCATTTTAAGCTATATTCAAGATAACCTCGGTTGGGGTCTGGGCTTCGGCATTCCCTGCATCTGCTCCATAGTTGCCCTCCTCGTCTTCTTACTTGGAACTCAAACTTATCGGTTCGTTAAGTTAGCTAACGATGAAGAGAAACCATTCATGAGAATTGGCCGGGTTTTTTTCAATGCGGCTCGAAACTGGAGAACTACATCTTCGGAGATTGATATTTTAGAGGAAGGTCAAGACGCATTGCTTTATCAAAGATCTGGACAATTGAGGTTCCTTAACAAGGCTTTGGTTGCTCCAATGGACTCCGATGAAGATGGGAATACGTGTAACATAGTCGACGTTGAGGAAGCAAAGGGCATACTAAGGCTCATCCCCATTTGGATAGCAAGTTTGAGTTATGCCATCGTTTTATCACAATGTTCAACCTTCTTCGTCAAGCAAGGTGCCACCATGGACAGATCAATCACACCAAGCTTCAAAATACCCGCTGCTACAATCCAATGCTTTGGCTGCATTGCTGTTGTGCTCTTTGTTCCGATCTATGACCGACTTCTGGTTCCCATAGCGAGAATATTCACCCTCAAACCCTCTGGAATCTCAATGCTCCAAAGAATCGGAGTTGGGATGTTCATATCCACTCTTTCAATGGTGGTGGCCGCTCTTGTTGAAGTGAAAAGGCTAGCAGTCGCTCGAGAACATGGGTTAACTCAAAACCCAAACTCTACAGTTCCTATCACCATCTGGTGGCTAACTCCTCAGCTCCTCCTCCTGGGAGTTTCGAGCGTTTTCACAATGGTAGGTTTGCAGGAGTTCTTCTATGACCAAGTTTCGAGCGAGGTAAAGAGTGTGGGACTTGCACTATATCTGAGCATCTTTGGCGTCGGGAATTTACTTAGCGGCATACTTGTATCCGTCATAGAAGATGCAACTGGTGGAGACGATGGAAGAGGTGGGTGGTTTGCCAACAACATAAACAGGGCGCATCTTGATTACTTTTATTGGCTTCTTGCCGGCATTGGTAAGATGCAATCCACAACTGGTGCTGCTTCTACTGCTACTGCTACTGCTAGTAGTCGTACCTCCGCTGGCGGCGCCGGCCTTGCTCGCTTCCGCTCTGCTCCTGCCGCCTGGTTGGAAGCCCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGACTCAGCTTCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCCACTCTCGACATCTCTCCCACCCCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAG 2346 49.53 MKEEYGRHEGFTQLSLSASNKLRRGWMSFISNFDSQFPYMDDSLILNDAAPDNRRSQSGGWRAAGVIIGVEIAERFAFFGISTNLVSYLTVEMGQSMADAAQNVNLWIGTASLLPLLAASFADSFLGRYLTIILASALYILGLGLLTLSAMLASPSSFQRSGSAASGASSRPVLHLVFFFTSLYLVAFAQGGHKPCLQAFGCDQFDGEDPQECIAKCSFFNWWYFSTTLGSFIALIILSYIQDNLGWGLGFGIPCICSIVALLVFLLGTQTYRFVKLANDEEKPFMRIGRVFFNAARNWRTTSSEIDILEEGQDALLYQRSGQLRFLNKALVAPMDSDEDGNTCNIVDVEEAKGILRLIPIWIASLSYAIVLSQCSTFFVKQGATMDRSITPSFKIPAATIQCFGCIAVVLFVPIYDRLLVPIARIFTLKPSGISMLQRIGVGMFISTLSMVVAALVEVKRLAVAREHGLTQNPNSTVPITIWWLTPQLLLLGVSSVFTMVGLQEFFYDQVSSEVKSVGLALYLSIFGVGNLLSGILVSVIEDATGGDDGRGGWFANNINRAHLDYFYWLLAGIGKMQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSDLDSASADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISPTPKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDK 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 85430 93722 + Chy9G157250.1 Chy09g00009 232906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00009 782 CDD MFS_NPF5 61 574 IPR044739 GO:0042937|GO:0042938|GO:0071916
Chy09g00009 782 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 750 782 IPR011598 GO:0046983
Chy09g00009 782 Gene3D MFS general substrate transporter like domains 41 579 IPR036259 -
Chy09g00009 782 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 45 578 IPR000109 GO:0016020|GO:0022857|GO:0055085
Chy09g00009 782 PANTHER FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 45 578 - -
Chy09g00009 782 Pfam POT family 129 545 IPR000109 GO:0016020|GO:0022857|GO:0055085
Chy09g00009 782 SUPERFAMILY MFS general substrate transporter 48 545 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01408 Chy-Chr7:18613667 Chy09g00009 Chy-Chr9:85430 2.39E-21 dispersed
Chy09g00009 Chy-Chr9:85430 Chy09g01036 Chy-Chr9:12867654 0 dispersed
Chy09g00008 Chy-Chr9:78986 Chy09g00009 Chy-Chr9:85430 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00009 K14638 - csv:105435629 1064.29