Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00075 ATGGCTCCCTTAACTTTTCTTATACTGTTCTTTACTATGCCTCCTTATTTTTTTGCAGACTCTAAATTTTTATACAATGGATTTCGTGAAGGAAAAGGATTGAATCTTGATGGGGTGGCTATTGTTAAGCCATCTGGTGCGTTATGCCTCACCAGCAATTCACAAAATGTAGTTGGCCATGCGTTTTATCCTGATCCATTTATGTTGTTTGATCCAAGCTCTCCTTCAAATGCTTCATCTTTCAGCACAACTTTTGTGTTTGCTATTGATCCTTCAATCCCCGGCCACGGCGGCCACGGCTTGGCCTTCACCTTGGCTCCATCAACCAGGTTTGATGAAGCTGAAAGTGGGCATTACCTTGGATTATTCAACCCTCTCAACGATGGAAATCCATCCAACCATATATTCGCTGTAGAATTCGACACTGTTAAGGGGCATGGTGGAGTAACGAATTTTAGAGGCAACCATATTGGGATTAATATCAATGGCATTTCTTCAGTTAAATCTCAATCGGCTGCTTCTAGCTATTATGTTGATGATACGGTTTGGAAAGAAATCCAAATTGATTCTGGTGATCCAATCGTTGCTTGGATTGATTATGATGGTCGTAGTAAAAATTTGAGCGTCACTATTGGTCTTTTGGAGCAAAAGCCAGAGAAGCCACTCATTTTATGTCATATTGATCTAACTTCTGTTATGAAGAATCAAATGTTTGTGGGGTTCGCTGCATCGACCGGTATCGAAACAAGCATTCATTACATTTTGGGATGGAGCTTTGCAGTGAATGCAACGGCACGGCAACTGAAGTACTCTCAACTTCCCAACAGACCAAAAGAGCAAAATATTTCTTCTTCCTCCAATAACAATTCCCAGTTGAAAGCTGTTTTAGCAGTGTCATCTATTATAGTCATTATGGCAATTGTTATCTTAACCTTCTTGTTTATAAGAATGAAGAAAGCAGAGAGCTTGGAGGATTGGGAAAAAGATTGCCCTCATAGATTCAACTTCAAGGATATTTACACAGCAACAAATGGATTTGATGACAGCGCCCAAATTGGAATTGGGGGATTCGGGTCAGTATATAAAGGCAAGTTAAGTTCAACAGGTGCTGAGATTGCTGTGAAGAGAGTCAAACGGGACTCAAGCCAAGGAATGAAGGAATTTGCTGCGGAAATCGAAAGCTTAGGACGATTAAGACACAAGAACTTGGTTAATCTTCAAGGATGGTGCAAGAAACAGAACGATCTTCTCATAGTTTACGATTATATTCCAAATGGAAGTCTTCATTCTCTTCTCCACACTTCAAAACAGAGCGTGATATTGAAGTGGGAACAAAGATTCAACATCCTCAAAGGCATTGCTGCAGGATTACTATATCTTCATGAAGATTGGGAGCAAGTAGTGATCCACCGAGATGTAAAGCCGAGCAATGTTCTAATTGACGCCGACATGAATGCACGATTGAGTGATTTCGGATTGTCAAGACAATACGACCACAACGAAATGTCACACACAACTCGAGTCGTAGGGACAATAGGCTACATACCACCAGAGTTGTTTCGCACGGGGAAGGCGTCGAAGAGCGCGGATGTATTTGCATATGGAGTTTTGCTTCTGGAAGTGGCGTGTGGAAGAAAGCCTCTAGGATCAAACCAATTCATATTGGTAGAGTGGGTGATGGAATGGTATGAAACAGGGGACATTCTTCATGTGGCTGATCCAAAATTGGATTCGATTTATAAGGTAGAAGAGATGGAGATGGTATTACAACTTGGGCTTCTTTGTACTCATTGGAAACAAGAAGCTCGACCCTCAATGAGACAAGTTATGCGGTTCCTTAATAGAGAAGACCCACTTCCAGCATCCGATGCATGGACTAATTCTCGAAGTATCTTTGAATCCAGTTCAAGATTGACAATGACCGATCGTTCTTCATCCATGTCTGTCGGTCCGATCTCCACTGCCTCCATAAACGCAGGAAGATAG 1986 41.64 MAPLTFLILFFTMPPYFFADSKFLYNGFREGKGLNLDGVAIVKPSGALCLTSNSQNVVGHAFYPDPFMLFDPSSPSNASSFSTTFVFAIDPSIPGHGGHGLAFTLAPSTRFDEAESGHYLGLFNPLNDGNPSNHIFAVEFDTVKGHGGVTNFRGNHIGININGISSVKSQSAASSYYVDDTVWKEIQIDSGDPIVAWIDYDGRSKNLSVTIGLLEQKPEKPLILCHIDLTSVMKNQMFVGFAASTGIETSIHYILGWSFAVNATARQLKYSQLPNRPKEQNISSSSNNNSQLKAVLAVSSIIVIMAIVILTFLFIRMKKAESLEDWEKDCPHRFNFKDIYTATNGFDDSAQIGIGGFGSVYKGKLSSTGAEIAVKRVKRDSSQGMKEFAAEIESLGRLRHKNLVNLQGWCKKQNDLLIVYDYIPNGSLHSLLHTSKQSVILKWEQRFNILKGIAAGLLYLHEDWEQVVIHRDVKPSNVLIDADMNARLSDFGLSRQYDHNEMSHTTRVVGTIGYIPPELFRTGKASKSADVFAYGVLLLEVACGRKPLGSNQFILVEWVMEWYETGDILHVADPKLDSIYKVEEMEMVLQLGLLCTHWKQEARPSMRQVMRFLNREDPLPASDAWTNSRSIFESSSRLTMTDRSSSMSVGPISTASINAGR* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 676279 678264 - Chy9G157910.1 Chy09g00075 232972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00075 661 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00075 661 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Chy09g00075 661 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 5 657 - -
Chy09g00075 661 SMART serkin_6 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00075 661 CDD lectin_legume_LecRK_Arcelin_ConA 22 262 IPR001220 GO:0030246
Chy09g00075 661 Gene3D Transferase(Phosphotransferase) domain 1 423 624 - -
Chy09g00075 661 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Chy09g00075 661 SUPERFAMILY Protein kinase-like (PK-like) 331 644 IPR011009 -
Chy09g00075 661 Gene3D - 19 265 - -
Chy09g00075 661 Pfam Legume lectin domain 21 273 IPR001220 GO:0030246
Chy09g00075 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Chy09g00075 661 Pfam Protein kinase domain 348 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00075 661 CDD STKc_IRAK 352 615 - -
Chy09g00075 661 MobiDBLite consensus disorder prediction 642 661 - -
Chy09g00075 661 PANTHER - 5 657 - -
Chy09g00075 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 278 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02166 Chy-Chr4:26760816 Chy09g00075 Chy-Chr9:676279 2.09E-177 dispersed
Chy04g02167 Chy-Chr4:26764412 Chy09g00075 Chy-Chr9:676279 0 dispersed
Chy04g02280 Chy-Chr4:27378991 Chy09g00075 Chy-Chr9:676279 0 dispersed
Chy04g02281 Chy-Chr4:27384198 Chy09g00075 Chy-Chr9:676279 0 dispersed
Chy09g00075 Chy-Chr9:676279 Chy12g00930 Chy-Chr12:14686138 1.30E-136 dispersed
Chy09g00075 Chy-Chr9:676279 Chy04g02165 Chy-Chr4:26757558 1.42E-180 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71450 PF00069 Pkinase 1.40E-52 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00075 - - csv:101205100 1250.73