Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00091 ATGGTTACTGCAGCGGTTGAGAATGGCGGAAGCGATATGGTAATTGATGGTAACGAACAGAAGCCGAAGAATATTGTGTCTGATGGGTTCGATGCGAATTATCTCAAGATTTATTACGGAAAGCTTTTCCCGTATGCTGATTTTTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCGGGCAGTGACCAATCATACTTTGGCCGAAGAGAGTTTTCATTCACCTTGGATAATGATATTTATCTACGATTCCAATCTTTCAATACTCTTTCTGAAATGGAAATTTCGATCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGTGTGGATCCTGCAAAGAGACATGCATATGCTGGCGATAACGTATTTACTCCAGTGGAAAGGGAGCTAGTTTTTGATATTGATATGACCGACTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTAGATTGCTGGCCTCTAATGACAGCTGCCATCAAAGTGATCCATACTACCCTTCGAGATGACTTTGGATTTAACCACATTCTATGGGTATTTAGTGGTCGCCGTGGTGTTCATTGTTGGGTCTGTGATGGAAAAGCTAGAAGGTTGTCTAATGATCAGCGATCTGCCATTGCTGAATATTTCCATTTATATCAGGTTATACTGTGGTGTTACAAAATATTGGCCTATTGGGGAATTTTAGTGTCTTTGGCTATGGAGCTGAATATGGTTGATGTGCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCAGTTCTTCATCCATTTCTCGTGAGATCGTACACAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTCGTAGTCAAAAGATTTTTTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCCTGATGAATCCATTACCTCAGACCTACGGGGAAGGTGGCAAGATAATAGGCGATCCTCTAAAAATGATGTTAACTCATTAAGATGGGAGCAACTGAAAAGTCTATTGCAATCAGGGAAACATAAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTACCCTAGGCTTGATTCGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCTATTGACCCTGAACACTGTGATGAGTTTGATCCGACTACTGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAGACATGGAAGTAGATAGTGAGAATGACTGGGATATAACCTCACTTGGCGAATCAATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTAAAATCATGCAAGAGGAAAGACGTCTCCAGCCTTCCTCTTCGCGTACCAAGACTTCCGAAACTCACTGCCGCCCGCCGTTTCCCTCCGACTAGCCTCCATACGGCCCACGTCGTCTCCGGCTCACGCTGCCCTCGACCACTGGTTTGCCTCCCGGCTGTTTCTCTTTCTCCCAATCCATCTCTCGCAGCTTTCTGTCTCCCCTTAAAATCACGTCCTTCGGCCACCGCCGCCGCCGGGGAAATAAATAGTCATTCTTCCACAGGGAAGTAA 1632 42.95 MVTAAVENGGSDMVIDGNEQKPKNIVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKHPGSDQSYFGRREFSFTLDNDIYLRFQSFNTLSEMEISIKEKCPFKIDIGPVYSVDPAKRHAYAGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIHTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNDQRSAIAEYFHLYQVILWCYKILAYWGILVSLAMELNMVDVQGNENSRKKISLTGPVLHPFLVRSYTEVLKDSFESQLLRSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNRRSSKNDVNSLRWEQLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTKHMNHLLKAPFCVHPKTGRICVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSENDWDITSLGESIRFFRSAFLQPLLKSCKRKDVSSLPLRVPRLPKLTAARRFPPTSLHTAHVVSGSRCPRPLVCLPAVSLSPNPSLAAFCLPLKSRPSATAAAGEINSHSSTGK* 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 799919 809101 - Chy9G158070.1 Chy09g00091 232988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00091 543 Pfam DNA primase small subunit 137 398 IPR002755 GO:0003896|GO:0006269
Chy09g00091 543 SUPERFAMILY Prim-pol domain 32 424 - -
Chy09g00091 543 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 36 417 IPR014052 GO:0003896|GO:0006269
Chy09g00091 543 PANTHER DNA PRIMASE 41 222 - -
Chy09g00091 543 Gene3D DNA primase, PRIM domain 23 459 - -
Chy09g00091 543 CDD AE_Prim_S 44 407 IPR014052 GO:0003896|GO:0006269
Chy09g00091 543 PANTHER DNA PRIMASE SMALL SUBUNIT 249 464 IPR014052 GO:0003896|GO:0006269
Chy09g00091 543 PANTHER DNA PRIMASE SMALL SUBUNIT 41 222 IPR014052 GO:0003896|GO:0006269
Chy09g00091 543 PANTHER DNA PRIMASE 249 464 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00091 K02684 - csv:101203146 867.07