Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00113 ATGGCTTCTTTGGCTGCTTCCACCGCCGCTGCCTCCCTCGGCGTCTCTGAAATGCTAAGAAACCCTCTTAGCTTCTCCTCCAGGTCCGCTCCCTCCCCTTCTACCCCCGCCACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCCGCAGCACAGGCCAAGCCAAAGCCCTCTGCTGCCTCTCCCGTCAACGACGAGCTCGCCAAGTGGTATGGGCCGGATAGAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCCGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGCAAGAAGCCCGAAGACTTCACCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGCTAACTGTGGCCCCGAAGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCCGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCAGGAGGGCCATTCGACCCATTGGGGTTAGCAGACGACCCGGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAATTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAATTTGCTCACAGTCATTTCAGGGAATGCTGAAAGAGTTCCAACTCTTTAA 867 50.52 MASLAASTAAASLGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAQAKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL* 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 941941 943780 - Chy9G158290.1 Chy09g00113 233010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00113 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
Chy09g00113 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Chy09g00113 288 SUPERFAMILY Chlorophyll a-b binding protein 70 278 - -
Chy09g00113 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 288 IPR001344 GO:0009765|GO:0016020
Chy09g00113 288 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00166 Chy-Chr2:1171702 Chy09g00113 Chy-Chr9:941941 1.36E-65 dispersed
Chy09g00113 Chy-Chr9:941941 Chy09g00695 Chy-Chr9:9241369 2.85E-40 dispersed
Chy12g01533 Chy-Chr12:19057148 Chy09g00113 Chy-Chr9:941941 2.66E-32 dispersed
Chy09g00113 Chy-Chr9:941941 Chy11g01011 Chy-Chr11:14276644 8.39E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00113 K08916 - csv:101218137 553.518