Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy09g00143 | ATGGCCGTTCCCGTGGTTCAGTTCCCGATCTTCCTGGCTGTCAGAGTCCTCGGAATGCTTGTGGCAGCTCTTCTTTTCATTTGGACCTTGCATTTCCGTGGAGGATTGGCACTTATCTCAGACAACAAGGATCATATCTTCAATGTCCATCCGGTTCTTATGGTGACTGGACTTATTCTTCTAAATGGTGAAGCAATGTTAGCATACAAGACAGTTACAGGAACCAAAAACTTCAAAAAACTAGTTCATCTCACTCTCCAATTTGTTGCATTCTTTTTAAGTCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGAAAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTATTTGGCGTCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGGTCTAGAAACAGCAGAGCTACTCTATTGCCATGGCATGTTTTTTTTGGCGTTTACATATATGGCCTTTCCATTGCTACAACCGTAACTGGATTGTTGGAAAAAGCTACATTCCTTCAAACTAGCAAGGTAATTTCACGTTATTCGAATGAGGCTTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGAGGTCTTGTGATTTTGGCGGTTATTGCTCCGTCGTATGCTAAAGGTGATATTAACAGAGGGCCAGCAGAATAG | 699 | 42.63 | MAVPVVQFPIFLAVRVLGMLVAALLFIWTLHFRGGLALISDNKDHIFNVHPVLMVTGLILLNGEAMLAYKTVTGTKNFKKLVHLTLQFVAFFLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSIFLFGVQWSAGFVTFWYPGGSRNSRATLLPWHVFFGVYIYGLSIATTVTGLLEKATFLQTSKVISRYSNEALLINSLGVLIVLLGGLVILAVIAPSYAKGDINRGPAE* | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1221580 | 1224484 | - | Chy9G158590.1 | Chy09g00143 | 233040 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy09g00143 | 232 | PANTHER | CYTOCHROME B561-RELATED | 1 | 228 | IPR043205 | GO:0016491 | |
| Chy09g00143 | 232 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Chy09g00143 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Chy09g00143 | 232 | Gene3D | - | 1 | 228 | - | - | |
| Chy09g00143 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Chy09g00143 | 232 | PANTHER | B561, PUTATIVE-RELATED | 1 | 228 | - | - | |
| Chy09g00143 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy04g00019 | Chy-Chr4:196033 | Chy09g00143 | Chy-Chr9:1221580 | 6.08E-67 | transposed | |
| Chy10g01108 | Chy-Chr10:16116762 | Chy09g00143 | Chy-Chr9:1221580 | 1.20E-57 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy09g00143 | K08360 | - | csv:101212633 | 435.261 |