Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00148 ATGGCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGATTCTTCATTTTTTTCACCTCCTTCTCCTTCTCCTCCGGCGGAATCTGCAACCTCTCCCTCATCTCCAACATCCTCTGTGCCTAATCAGACTGGTGAACCTCCTTCATCACCTTCTAGTTCTTCAGCTCCACCTCCTCAATCACCACCAGCTGTTCCTGATCCTTCTCCTACATTGTCTCCTCCTCCAGTGACAGCATCACCTGCTCCACCAACATCCTCACCTCCTTCTCCCCCTACTGGTTCCACACCTTCACCCCCACAATCTTCGCCCTCACCACCGCCACCTTCGACACCATCCTCCCCATCACCACCTTCAACATCAACCTCTCCACCACCACCTTCAACAACAACTTCTCCACCGCCACCTTCAACAACAACCTCTCCACCACCACCTTCAACAACATCACCATCACCACCTCCCCCCGAGGGATCCACTCCCTCTCCTCCTCCACCTGAAGCTTCACCTTCCCCTCCTGATTTGTCACCTCCGCCACCACCAGCAGCGGAAGGTGGTTCTCCACCTCCTCCATCCAATCCTAGACCTCCATCTTCAACTCCTTCTCCCCCTCCCCCCGAAACAATTTCACCTTCTCCATCTCCACCAACTAATGTCCCAACACCACCTTCATCAACAGGAGAACCACCTAAAGTATCTCCCCCATCCCACAAGGTTTCTCCTCCTCCTCCTGATTCTCAATCTCCACCTTCAGATAACTCCCCTTCACCAAGATCCACAGTACCATCACCTCCTCCTTCAGTCCCTTCATCGTCTGCTCCTCCTCCAGTTAGTGATCCTGGTTCTCCAACTAATTCATCTGGTGGAAGTCCTGTTACTCCTCCAGTTTCCATTACACCAGAACAACCAATTCCACCAATCAATGGTACCAATACTACAGAAAATAGCTCAGCCACTGGTAAAGGGGGTTTCAGCACTGGAACATCTGTGGCAGTTGGCAGTGTGGTTGGTGTTCTATTCCTCAGTCTTGTTATCATTGCTATGTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAAAATATCCCTTACACCATGGCTTCTCCTTTTTCCTCCCAAAACTCAGATTCCCTCTTCCTAAGGCCCCATTCTTCAGTTCCTGTATTAGGAAGTCGTACTGATAGTGAGTTCAAGTATTCACCATCAGAAGGAGGTGGAGTAGGTAATTCGAGATCGTTTGCTTATGATGACCTACACCAGGCAACAGATGGGTTCGCATCGAATAATCTTTTGGGGGAAGGTGGTTTTGGTTGTGTATACAAAGGCACCCTTGTAGATGGAAGAGACGTAGCTGTTAAACAACTTAAAGTGGGTGGTGGTCAGGGGGAACGAGAGTTCAGAGCTGAAGTTGAGATTATTAGCCGAGTACACCATCGGCATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGATTATCAAAGATTGCTTGTCTACGATTATGTTCCAAACAATACCCTTCATTACCATCTACACGGGGAGAACAGGCCAGTTTTGGCTTGGGGTACACGTGTTCGAATTGCTGCTGGTGCAGCTCGTGGAATTGCTTATCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTTCTTGATATCAACTTTGAAGCTCAGGTTGCTGATTTTGGGCTTGCTAAATTGGCACTGGATTCACATACTCATGTAACAACTCGTGTCATGGGAACCTTTGGATATATGGCTCCAGAGTATGCAACAAGTGGGAAATTGACGGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTGATTACTGGCCGAAAGCCTGTAGATTCTTCTCAGCCTCTAGGGGATGAAAGCTTAGTTGAATGGGCTCGGCCATTGCTTGCGCAAGCTATTGAGGAAGAAAATTTTGATGAATTGGTGGATCCAAGGCTAGACAACAATTACATAGATAGAGAAATGTTTCGGATGATTGAAGCAGCAGCCGCTTGCGTTCGTCATTCGGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAGAGTGGAGTGTTTGATTCAGCTGAACATTCTGCTCAGATTAGAATGTTTCAAAGAATGGCTTTCGGCAGTCAAGATTACAGTTACGGTTACTCTGATCGAGATCGAAGTCGAAGTTATAGTCAAAGTCAGAGTAGCTGGAGTAGAGAATCCAGAGATCAAAGTCCCTCGGCACCTATGAATCGATCCCGGCAATGGAACATCTGA 2349 47.13 MASPSPSISPPENPSDSSFFSPPSPSPPAESATSPSSPTSSVPNQTGEPPSSPSSSSAPPPQSPPAVPDPSPTLSPPPVTASPAPPTSSPPSPPTGSTPSPPQSSPSPPPPSTPSSPSPPSTSTSPPPPSTTTSPPPPSTTTSPPPPSTTSPSPPPPEGSTPSPPPPEASPSPPDLSPPPPPAAEGGSPPPPSNPRPPSSTPSPPPPETISPSPSPPTNVPTPPSSTGEPPKVSPPSHKVSPPPPDSQSPPSDNSPSPRSTVPSPPPSVPSSSAPPPVSDPGSPTNSSGGSPVTPPVSITPEQPIPPINGTNTTENSSATGKGGFSTGTSVAVGSVVGVLFLSLVIIAMWFVQKRKRRKKNIPYTMASPFSSQNSDSLFLRPHSSVPVLGSRTDSEFKYSPSEGGGVGNSRSFAYDDLHQATDGFASNNLLGEGGFGCVYKGTLVDGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVPNNTLHYHLHGENRPVLAWGTRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWARPLLAQAIEEENFDELVDPRLDNNYIDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEHSAQIRMFQRMAFGSQDYSYGYSDRDRSRSYSQSQSSWSRESRDQSPSAPMNRSRQWNI* 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1259517 1265528 - Chy9G158640.1 Chy09g00148 233045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00148 782 SUPERFAMILY Protein kinase-like (PK-like) 408 698 IPR011009 -
Chy09g00148 782 MobiDBLite consensus disorder prediction 1 32 - -
Chy09g00148 782 Pfam Protein tyrosine and serine/threonine kinase 428 698 IPR001245 GO:0004672|GO:0006468
Chy09g00148 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Chy09g00148 782 MobiDBLite consensus disorder prediction 744 782 - -
Chy09g00148 782 MobiDBLite consensus disorder prediction 33 52 - -
Chy09g00148 782 MobiDBLite consensus disorder prediction 53 282 - -
Chy09g00148 782 CDD STKc_IRAK 431 701 - -
Chy09g00148 782 MobiDBLite consensus disorder prediction 304 322 - -
Chy09g00148 782 SMART serkin_6 425 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00148 782 MobiDBLite consensus disorder prediction 748 782 - -
Chy09g00148 782 ProSitePatterns Protein kinases ATP-binding region signature. 431 453 IPR017441 GO:0005524
Chy09g00148 782 ProSiteProfiles Protein kinase domain profile. 425 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00148 782 MobiDBLite consensus disorder prediction 1 322 - -
Chy09g00148 782 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 162 753 - -
Chy09g00148 782 Gene3D Phosphorylase Kinase; domain 1 398 500 - -
Chy09g00148 782 PRINTS Proline rich extensin signature 50 62 - -
Chy09g00148 782 PRINTS Proline rich extensin signature 22 38 - -
Chy09g00148 782 PRINTS Proline rich extensin signature 86 102 - -
Chy09g00148 782 PRINTS Proline rich extensin signature 65 86 - -
Chy09g00148 782 Gene3D Transferase(Phosphotransferase) domain 1 501 713 - -
Chy09g00148 782 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 162 753 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00148 Chy-Chr9:1259517 Chy11g00389 Chy-Chr11:3684568 1.34E-144 dispersed
Chy10g00904 Chy-Chr10:14739630 Chy09g00148 Chy-Chr9:1259517 1.04E-167 transposed
Chy12g00871 Chy-Chr12:14000637 Chy09g00148 Chy-Chr9:1259517 7.21E-22 transposed
Chy10g01098 Chy-Chr10:16036981 Chy09g00148 Chy-Chr9:1259517 1.17E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71451 PF07714 PK_Tyr_Ser-Thr 7.60E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00148 - - csv:101211665 914.835