Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00168 ATGAAGAGAACTGAGGCTACTGTTTCCTGTCTTGTGGCTTCTTTATTGTTTTGGGTTTCTTCAATAAATGGTTTGTTATCACCCAAAGGTGTTAACTATGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGATGCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCTCCTGAGAGTCTTGTCATTGGCTTAGGAACCCCAAGCCAGAACCTGTCTGGAACTCTTTCTTCAACCATTGGGAATTTAACAAACCTTCAAATTGTGTTGTTGCAGAACAACAATATCACAGGTCCAATTCCACCAGAGTTTGGAAGGCTCTCAAAGCTTCAAACACTTGATCTATCAAACAATTTCTTCACAGGGGAAATTCCTTCTTCTTTAGGCCATTTAAGAAGCCTACAGTACTTGAGGCTTAACAATAACAGTCTTTCTGGGGCAATTCCAATGTCTTTAGCTAACATGACACAGCTTGCCTTTCTTGATGTGTCTTATAATAACGTCAGTGGCCCTCTTCCTAGATTTCCCAGCAAAACATTCAACATTGTTGGGAACCCTCTGATTTGTGCGACCGGGTCGGAGGCCGGTTGCCATGGTACAACTCTAATGCCTATGTCCATGAATTTGAACAGTACACAAACTGGTTTACCTGCTGTGAGGTTGAAGAGTCATAAAATGGCCCTTACATTTGGCTTGAGCTTAGCTTGCCTATGTTTGATTGTTCTTGTGTTTGGACTGTTCATATGGTGGAGAAGACGAAGCAATCGACCTACATTCTTCGATGTAAAAGACCAACAACATGAGGAAATTTCGCTTGGAAATTTGAGAAGGTTTCAATTTAGAGAACTTCAGATAGCAACACACAACTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCGGATGGAACAGTTGTAGCTGTTAAGAGGCTCAAAGATGGGAATGCTAGTAGAGGCGAGATCCAGTTTCAGACTGAAGTTGAGATGATCAGCCTGGCCGTGCACCGTCATCTCCTCAGATTATATGGATTTTGCAACACACCAACTGAAAGGCTTCTTGTTTATCCATATATGTCGAATGGAAGTGTTGCATCACGTCTCAAAGGAAAACCGGTATTAGACTGGGGAACAAGGAAGAGAATTGCTATAGGAGCTGCTAGGGGATTGTTATACCTACATGAACAGTGTGACCCAAAGATAATACATAGAGATGTTAAGGCTGCAAACATATTGCTTGATGACTACTGCGAAGCTGTCGTTGGAGATTTTGGGTTAGCAAAACTTCTGGATCATCAAGATTCACATGTCACAACTGCTGTGAGAGGCACTGTGGGACATATAGCTCCCGAGTATCTATCCACCGGACAGTCGTCTGAGAAAACAGATGTTTTCGGATTCGGAATCCTACTCCTTGAACTGATCACAGGGCAGAGAGCCCTTGAATTTGGCAAAGCAGCTAATCAGAAAGGAGGCATTCTTGACTGGGTGAAGAGGATTCATCTAGAGAAGAAGCTCGAAGTGTTAGTGGACAAGGATCTAAAAGCCAACTATGACAGAGTTGAACTAGAAGAAATGGTTCAAGTGGCTTTGTTATGCACACAATACTTACCAGGACATAGACCAAAAATGTCAGAAGTTGTGAGAATGCTTGAAGGAGAAGGGCTTGCTGTGAGATGGGAAGCTTCTCAAAGAGTTGATTCAACAAAGTGCAAACCCCATGATTTCTCTTCCTCAGACAGATACTCTGATCTCACAGATGATTCTTCATTGCTGGTTCAAGCCATGGAGCTCTCTGGTCCAAGGTGA 1875 42.61 MKRTEATVSCLVASLLFWVSSINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDAVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSSTIGNLTNLQIVLLQNNNITGPIPPEFGRLSKLQTLDLSNNFFTGEIPSSLGHLRSLQYLRLNNNSLSGAIPMSLANMTQLAFLDVSYNNVSGPLPRFPSKTFNIVGNPLICATGSEAGCHGTTLMPMSMNLNSTQTGLPAVRLKSHKMALTFGLSLACLCLIVLVFGLFIWWRRRSNRPTFFDVKDQQHEEISLGNLRRFQFRELQIATHNFSSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLRLYGFCNTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGGILDWVKRIHLEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR* 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1428418 1431997 + Chy9G158840.1 Chy09g00168 233065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00168 624 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 8 624 - -
Chy09g00168 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00168 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Chy09g00168 624 SUPERFAMILY L domain-like 33 204 - -
Chy09g00168 624 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Chy09g00168 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 624 - -
Chy09g00168 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Chy09g00168 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Chy09g00168 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Chy09g00168 624 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Chy09g00168 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Chy09g00168 624 SUPERFAMILY Protein kinase-like (PK-like) 280 574 IPR011009 -
Chy09g00168 624 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00168 624 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01117 Chy-Chr7:16085302 Chy09g00168 Chy-Chr9:1428418 5.55E-110 dispersed
Chy09g00168 Chy-Chr9:1428418 Chy09g00415 Chy-Chr9:3647389 0 dispersed
Chy02g00222 Chy-Chr2:1483656 Chy09g00168 Chy-Chr9:1428418 0 transposed
Chy02g01379 Chy-Chr2:10377317 Chy09g00168 Chy-Chr9:1428418 8.61E-36 transposed
Chy02g02154 Chy-Chr2:25783355 Chy09g00168 Chy-Chr9:1428418 0 transposed
Chy03g01723 Chy-Chr3:18729498 Chy09g00168 Chy-Chr9:1428418 0 transposed
Chy07g00853 Chy-Chr7:11131536 Chy09g00168 Chy-Chr9:1428418 0 transposed
Chy09g00971 Chy-Chr9:12416217 Chy09g00168 Chy-Chr9:1428418 5.67E-62 transposed
Chy10g00223 Chy-Chr10:5692129 Chy09g00168 Chy-Chr9:1428418 6.37E-23 transposed
Chy10g00981 Chy-Chr10:15283436 Chy09g00168 Chy-Chr9:1428418 1.11E-09 transposed
Chy12g00445 Chy-Chr12:5391863 Chy09g00168 Chy-Chr9:1428418 5.20E-25 transposed
Chy10g01091 Chy-Chr10:15982725 Chy09g00168 Chy-Chr9:1428418 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71452 PF00069 Pkinase 5.70E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00168 - - csv:101209443 1228.77