Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g00217 | ATGGCTAAGAAGGATGATTCTGCGACAAGACCTCCACTTCAACGCCCCACTATTACTCTCCCGCCTCGTCCTTCTATGGAGGCTTTTTTCACCGGCGGTTCCACTGGGGTTAGCCCTGGTCCTATGACTCTTCTTTCAAGTTACTTCGCCGACGGTGCCGTTGACTCTCCTTCCTTCTCCCAGCTTCTCGCTGGAGCTATGGCTTCTCCGATGGCTATGGGGTTTTTCGGAACTGGGTCTACTCCCAATTATTACGCCAAGGATGGACCCGCCTCGGAATTGGAATTTGGGATGAAACAATCGAAGCCGGTGAATTTAGTGGTAGCTCGTTCTCCTTTGTTCTCGGTTCCTCCGGGGCTTAGTCCTTCTGGGTTGCTTAATTCGCCGGGGTTTTATCCTCCTCAGAGTCCATTTGGAATGTCACATCAGCAGGCATTGGCTCAAGTTACTGCTCAAGCAGCATTGGCAAATTCTCATATGCATATGCAGCAAGCTGAATACCAACATTCTTCGGTACCAGCTCCTACAGAACCGTTAGTGCGTGATCCATCATTTTCTCTTGATGAAGCATCTCAACTGGCCATAATACCCTCCACATCAGACACAAAAAGTCTGATTGCAGAATCGACAGAAGTTTCTCATTCTGATAGAAAATATCAACCTCCTCCTCCCCCCCATGGCTCTGATAAACCTGCAGATGATGGCTATAACTGGCGTAAATATGGGCAGAAGTTGGTTAAGGGCAGTGAATTTCCACGAAGCTATTACAAATGCACTCATTTGAATTGTCCCGTAAAAAAGAAGATTGAGCGCTCACCTGATGGTCAAATTACTGAAATTATTTACAAAGGCCAGCACAACCATGAACCTCCTCCAGCCAACAAACGTGCAAGAGATAATATTGAGCCAGCTGGATGTACAAATTCATTGATTAAGCCTGAATGTGGCTTGCAAAACCAAGCTGGAATTTTGAACAAGTCAAGTGAAAATGTGCAATTAGGGTCTAGTGACAGTGAAGGACGAGCTGATACCGAGATAACGGATGACAGAGATGAAGATGAGCCAAATCCAAAGCGGCAGAACATTGACGCAGGGACATCTGGAGTTGCCTTGTCACATAAAACACTCACAGAACCAAAAATCATTGTCCAAACGAGAAGTGAGGTTGACCTGTTAGATGACGGTTATAGGTGGCGCAAGTATGGGCAGAAAGTGGTTAAAGGAAATCCTAACCCTAGGAGCTACTACAAATGCACTAGTGCTGGGTGCAACGTCCGAAAGCATGTTGAGAGGTCTTCAACGGACTCGAAAGCTGTTGTAACTACATACGAAGGGAAACATAACCATGATGTTCCTGCAGCCAGAAACAGCAGCCACCACACTGTCAACAACACTGTCCACCATATCAAACCACTCAAAGTTGTAGCTCAGAAACATCCATTACTTAAAGAGATGGAATTTGGAACTAATGACCAGAGACCTGCCGTTTTGCAGCTTAAAGAAGAACAAATCACCGTGTAA | 1521 | 45.89 | MAKKDDSATRPPLQRPTITLPPRPSMEAFFTGGSTGVSPGPMTLLSSYFADGAVDSPSFSQLLAGAMASPMAMGFFGTGSTPNYYAKDGPASELEFGMKQSKPVNLVVARSPLFSVPPGLSPSGLLNSPGFYPPQSPFGMSHQQALAQVTAQAALANSHMHMQQAEYQHSSVPAPTEPLVRDPSFSLDEASQLAIIPSTSDTKSLIAESTEVSHSDRKYQPPPPPHGSDKPADDGYNWRKYGQKLVKGSEFPRSYYKCTHLNCPVKKKIERSPDGQITEIIYKGQHNHEPPPANKRARDNIEPAGCTNSLIKPECGLQNQAGILNKSSENVQLGSSDSEGRADTEITDDRDEDEPNPKRQNIDAGTSGVALSHKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERSSTDSKAVVTTYEGKHNHDVPAARNSSHHTVNNTVHHIKPLKVVAQKHPLLKEMEFGTNDQRPAVLQLKEEQITV* | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1819693 | 1823754 | + | Chy9G159330.1 | Chy09g00217 | 233114 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g00217 | 506 | MobiDBLite | consensus disorder prediction | 198 | 237 | - | - | |
Chy09g00217 | 506 | SUPERFAMILY | WRKY DNA-binding domain | 384 | 452 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | MobiDBLite | consensus disorder prediction | 283 | 305 | - | - | |
Chy09g00217 | 506 | SMART | WRKY_cls | 392 | 451 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | SMART | WRKY_cls | 232 | 290 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | PANTHER | WRKY PROTEIN | 10 | 505 | - | - | |
Chy09g00217 | 506 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Chy09g00217 | 506 | MobiDBLite | consensus disorder prediction | 341 | 359 | - | - | |
Chy09g00217 | 506 | Pfam | WRKY DNA -binding domain | 393 | 449 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | Pfam | WRKY DNA -binding domain | 233 | 289 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | SUPERFAMILY | WRKY DNA-binding domain | 230 | 291 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | ProSiteProfiles | WRKY domain profile. | 227 | 291 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | MobiDBLite | consensus disorder prediction | 328 | 371 | - | - | |
Chy09g00217 | 506 | ProSiteProfiles | WRKY domain profile. | 387 | 452 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | Gene3D | WRKY domain | 226 | 292 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | Gene3D | WRKY domain | 377 | 453 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy09g00217 | 506 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 10 | 505 | IPR044810 | GO:0003700 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g02291 | Chy-Chr4:27436313 | Chy09g00217 | Chy-Chr9:1819693 | 1.07E-81 | dispersed | |
Chy06g00013 | Chy-Chr6:100402 | Chy09g00217 | Chy-Chr9:1819693 | 2.11E-19 | dispersed | |
Chy06g01876 | Chy-Chr6:22629322 | Chy09g00217 | Chy-Chr9:1819693 | 1.23E-17 | dispersed | |
Chy09g00217 | Chy-Chr9:1819693 | Chy02g01672 | Chy-Chr2:16368321 | 2.37E-14 | dispersed | |
Chy02g02124 | Chy-Chr2:25534349 | Chy09g00217 | Chy-Chr9:1819693 | 2.44E-15 | transposed | |
Chy11g01398 | Chy-Chr11:20393355 | Chy09g00217 | Chy-Chr9:1819693 | 1.11E-74 | transposed | |
Chy10g01039 | Chy-Chr10:15648725 | Chy09g00217 | Chy-Chr9:1819693 | 1.01E-148 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18454 | PF03106 | WRKY | 3.20E-25 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g00217 | - | - | csv:101223114 | 1015.37 |