Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00267 ATGGGTTTGGCTCCTAATGATTCCAAGGTTGAGACATGGATTGAGGGGAAGTCAAGAACAGCTACAGAGAAGAAGAAGAAGAAGGAGAATGAGTTGGAGGAGGAGACTGGATGTTGGGTTAAGTTGAAGTTTATTGGGAGTTGCATTCCTTCTAGATCAAAGGTTGATAGTTCTCTGAGTGGATCAAAGGTTGATAGCTTCATCAGTGGCACTAGTACCCATTGCGATAGTAAATCTAAACTGGACGAAAAAAGAGATATACTGGCTACTGCATTGGGGTCATCAGCGACAACTGATAATGCCGAAAGTAGTTCGTCCACTCCCAAGCTCAGTGCTGAGCTGAAGGTTGCTTCTCGGCTTCGTAAGTTCACTTTTAATGAGCTTAAGTTAGCCACAAGAAATTTCCGACCTGAGAGCCTTCTTGGTGAGGGAGGTTTTGGTTGTGTTTTCAAAGGATGGATTGAGGAGAATGGAACTGCTCCTGCTAAACCTGGAACTGGGCTTACAGTTGCAGTCAAGACTCTTAATCACGATGGCCTACAAGGTCACAAGGAGTGGATGGCTGAAGTTAACTTCCTCGGTGACCTCAACCATTCTAATCTTGTAAGATTGATTGGTTGCTGCATTGAAGATGATCAAAGGTTATTAGTTTATGAGTTTATGCCTCGTGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGCCCTTGCCACTTCCTTGGTCTATCAGATTGAAAATTGCGCTTGGTGCTGCTAAAGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGACCAGTGATATATCGTGATTTTAAAACGTCTAATATTCTATTAGATGCGGACTACAATGCTAAACTCTCAGACTTTGGACTTGCAAAAGATGGTCCCGAGGGTGACAAAACTCATGTTTCAACTCGGGTTATGGGAACATATGGTTATGCAGCTCCAGAATATGTGATGACTGGGCATTTGACATCAAAAAGCGATGTCTACAGCTTTGGAGTTGTCTTGCTTGAAATGCTAACCGGTCGAAGATCGATGGATAAAAATAGACCGAATGGGGAACACAACCTTGTTGAATGGGCTAGACCCCTGCTTGGAGACAAGAGGAAGTTCTACCGGCTGATAGATCCTCGCCTCGAATGTCACTTCTCAATCAAAGGTGCACAAAAAGCTGCAGAGCTTGCAGCTCACTGCCTTAGTAGAGATCCTAAAGCCAGACCTCCGATGAGTGAAGTTGTTGAAATTTTAAAACCTTTGCCAAACCTCAAGGACATGGCAAGTTCTTCCTATTACTTCCAAACCATGCAAGCAGACCGTGCTAGGTCCACCCCCAATGCTAAAAGTGTCGTTCGCACGCAGTCGATGTTTGTGGCAAGGAATGGGCAACACATTAGAAGCTTATCAAGTCCAAATGGTCCTCATGCTTCTCCATATAATCATCCCAATCAGTCACCAAAACCTGACAGGAGATAA 1473 44.13 MGLAPNDSKVETWIEGKSRTATEKKKKKENELEEETGCWVKLKFIGSCIPSRSKVDSSLSGSKVDSFISGTSTHCDSKSKLDEKRDILATALGSSATTDNAESSSSTPKLSAELKVASRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPAKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLGDLNHSNLVRLIGCCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRLKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPLLGDKRKFYRLIDPRLECHFSIKGAQKAAELAAHCLSRDPKARPPMSEVVEILKPLPNLKDMASSSYYFQTMQADRARSTPNAKSVVRTQSMFVARNGQHIRSLSSPNGPHASPYNHPNQSPKPDRR* 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2226466 2230399 - Chy9G159830.1 Chy09g00267 233164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00267 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Chy09g00267 490 MobiDBLite consensus disorder prediction 460 490 - -
Chy09g00267 490 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524
Chy09g00267 490 MobiDBLite consensus disorder prediction 1 32 - -
Chy09g00267 490 MobiDBLite consensus disorder prediction 12 32 - -
Chy09g00267 490 Gene3D Transferase(Phosphotransferase) domain 1 221 439 - -
Chy09g00267 490 ProSiteProfiles Protein kinase domain profile. 135 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00267 490 MobiDBLite consensus disorder prediction 460 483 - -
Chy09g00267 490 SUPERFAMILY Protein kinase-like (PK-like) 112 416 IPR011009 -
Chy09g00267 490 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 66 482 - -
Chy09g00267 490 Gene3D Phosphorylase Kinase; domain 1 110 220 - -
Chy09g00267 490 Pfam Protein tyrosine and serine/threonine kinase 139 416 IPR001245 GO:0004672|GO:0006468
Chy09g00267 490 CDD STKc_IRAK 141 419 - -
Chy09g00267 490 PANTHER OS01G0588500 PROTEIN-RELATED 66 482 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01319 Chy-Chr2:9766783 Chy09g00267 Chy-Chr9:2226466 3.02E-142 dispersed
Chy02g02032 Chy-Chr2:24341009 Chy09g00267 Chy-Chr9:2226466 1.79E-177 dispersed
Chy05g00828 Chy-Chr5:11900583 Chy09g00267 Chy-Chr9:2226466 9.52E-16 dispersed
Chy05g01292 Chy-Chr5:17153188 Chy09g00267 Chy-Chr9:2226466 7.40E-178 dispersed
Chy07g01112 Chy-Chr7:16064848 Chy09g00267 Chy-Chr9:2226466 5.80E-136 dispersed
Chy09g00267 Chy-Chr9:2226466 Chy12g00200 Chy-Chr12:2404994 4.80E-156 dispersed
Chy12g00891 Chy-Chr12:14274954 Chy09g00267 Chy-Chr9:2226466 1.73E-117 dispersed
Chy12g01332 Chy-Chr12:17663053 Chy09g00267 Chy-Chr9:2226466 1.69E-139 dispersed
Chy10g00975 Chy-Chr10:15233074 Chy09g00267 Chy-Chr9:2226466 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71456 PF07714 PK_Tyr_Ser-Thr 5.50E-48 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00267 - - csv:101211851 972.23