Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00287 ATGAAGATTTTCACCTTCTTCCTCAAATGGGTTTCTGTTTCTCTTCTTCTTTTGCTCTCTGTTTCTCCATCTTTTTCTGTAGTTCCTGAAGATGATATAAGGTGTCTTCGTGGTGTTAAGAATGCTCTTGTTGATCCTCTTGGAAGACTCAGTTCATGGGATTTCAAGAACACATCTGTTGGTCATCTCTGCAACAAATTCGTTGGTCTTTCCTGTTGGAATGACCGTGAGAATCGTATTCTCAGCCTTGAACTCAAAGATATGAAGCTCTCTGGTTCGATTTCTGAAGACTTACAGTACTGTGTAAGCTTGCAGAAACTGGATCTGTCCGGGAATAGCTTTTCCGGCGAGATCCCACCTCATATTTGTGAGTGGCTTCCGTATTTGGTTAGTATGGATTTGTCTAACAATCAATTTACTGGTTCTATTCCGGCTGATCTTGCCAGATGTTCTTATCTGAATTCGTTGCTTTTGTCTGATAATGAACTTTCTGGTACAATACCAGTTGAGCTTACGAGTTTGGGTAGGCTTAACAAATTTTCTGTTGCCAATAATCAACTTACTGGGACGATTCCATCATTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAATAGTGATTTATGTGGAGGGCCTGTTGGATCTAGTTGTGGTGGGTTGAGTAAGAAGAATCTTGCGATTATTATAGCTGCTGGTGTGTTTGGTGCTGCAGCTTCTCTGTTGTTAGGTTTTGGGTTATGGTGGTGGTATCATTCTAGAATGAATATGAAGAGGAGAAGGGGATATGGAGATGGGATTAGTGGGGATTGGGCTGATAGATTGAGAGCTTATAAGCTTGTTCAAGTTTCTTTGTTTCAAAAGCCTCTTGTGAAAGTTAAATTGGCTGATTTGATGGCTGCTACTAACAATTTCAATTCGGAAAACATTATAGTTTCTTCTAGAACTGGGACTACATATAGAGCTGTTCTTCCAGATGGTTCTCTAAGTACGTCGGGTCGAATTAAGGATGTTATTGATAAAGATCTTTGTGGGAAAGGGAATGATGAAGAGATCTTACAATTTCTGAAAATTACAATGAATTGCATCGTTTCTCGGCCTAAAGACAGGTGGTCTATGTATCAAGTTTATCAATCAATGAGAACCATGGCTAAAGACTACAGTTTCCCCGAACCAGATGATGAATTCCCACTTTTACTTGGCAAGGGAGATAATGATCCCATGTAG 1227 39.69 MKIFTFFLKWVSVSLLLLLSVSPSFSVVPEDDIRCLRGVKNALVDPLGRLSSWDFKNTSVGHLCNKFVGLSCWNDRENRILSLELKDMKLSGSISEDLQYCVSLQKLDLSGNSFSGEIPPHICEWLPYLVSMDLSNNQFTGSIPADLARCSYLNSLLLSDNELSGTIPVELTSLGRLNKFSVANNQLTGTIPSFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYHSRMNMKRRRGYGDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVSSRTGTTYRAVLPDGSLSTSGRIKDVIDKDLCGKGNDEEILQFLKITMNCIVSRPKDRWSMYQVYQSMRTMAKDYSFPEPDDEFPLLLGKGDNDPM* 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2408857 2410671 - Chy9G160030.1 Chy09g00287 233184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00287 408 Pfam Leucine Rich Repeat 103 123 IPR001611 GO:0005515
Chy09g00287 408 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Chy09g00287 408 PANTHER - 329 401 - -
Chy09g00287 408 SUPERFAMILY L domain-like 29 205 - -
Chy09g00287 408 Gene3D Phosphorylase Kinase; domain 1 265 362 - -
Chy09g00287 408 PANTHER - 16 328 - -
Chy09g00287 408 Gene3D Ribonuclease Inhibitor 30 220 IPR032675 -
Chy09g00287 408 PANTHER OS07G0107800 PROTEIN-RELATED 329 401 - -
Chy09g00287 408 PANTHER OS07G0107800 PROTEIN-RELATED 16 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00287 Chy-Chr9:2408857 Chy01g01480 Chy-Chr1:20550764 5.74E-10 dispersed
Chy09g00287 Chy-Chr9:2408857 Chy02g00590 Chy-Chr2:3585818 4.05E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00287 - - csv:101209638 594.734