Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00313 ATGGAGTTTCTGCTTCTTCTCATCCTCCTCCTCCTCCTCTCCCTCTTCTCTCATTCCTCCTCCGCTGCTCTCTCCCCCGACTACTACCGGAACTCCTGCCCTGAGTTTTCTCAAATCATCCGCGACACCGTGACCAACAAACAAATCACCAACCCCACTACTGCTGCCGCCACCCTCCGTCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGATGCCTCCATCCTCATCTCCTCCACTCCCTTTAACGCCGCCGAACGCAACGCCGACATCAACCTATCTCTCCCCGGCGATGCCTTCGACGTTGTCGTTCGTGCTAAAACAGCGCTCGAACTCTCCTGCCCCAACACCGTCTCCTGCGCCGACATCCTTGCCGCCGCCACTCGTGACCTCCTCACCATGGTCGGCGGTCCTTACTACACCGTCTTCCTTGGCCGCAAAGACGCCAAGGTTTCCAAAGCCTCCGGTATCGAAGGTACGCTCCCTAGACCCACCATGTCCGTTTCTGAGATCATCAGAATCTTCGCCTCCAGAGGATTTTCCGTTCAGGAAATGGTGGCATTAAGCGGGGCTCATTCAATTGGGTTCTCGCATTGCAAGGAATTCACCACTGAGATCTTCAATTACAGCAACAGCCATTACAACCCAAGATTTGCATTAGGGTTACAGAGAGCTTGCGCCGATTACAAGAAGAATCCAACTCTCTCTGTTTTCAACGACGTAATGACGCCGAACAAATTCGATAACATGTATTTCAAAAATCTGCAAAAGGGTCTAGGGCTCTTGAAGTCCGATGGTGTATTGTATAGCGATTCAAGAACGAGACCATGGGTGGAGAAATATGCTGCTGATGAGAGTGTGTTCTTCGCCGCGTTTTCTCAAGCGATGATGAAGCTTGGTGGCTATGGCGTCAAAGTGGGGAATGAAGGAGAAATCAGACGCAGGTGCGATGTATTTAACTGA 963 51.92 MEFLLLLILLLLLSLFSHSSSAALSPDYYRNSCPEFSQIIRDTVTNKQITNPTTAAATLRLFFHDCLPNGCDASILISSTPFNAAERNADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILAAATRDLLTMVGGPYYTVFLGRKDAKVSKASGIEGTLPRPTMSVSEIIRIFASRGFSVQEMVALSGAHSIGFSHCKEFTTEIFNYSNSHYNPRFALGLQRACADYKKNPTLSVFNDVMTPNKFDNMYFKNLQKGLGLLKSDGVLYSDSRTRPWVEKYAADESVFFAAFSQAMMKLGGYGVKVGNEGEIRRRCDVFN* 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2677518 2678480 - Chy9G160290.1 Chy09g00313 233210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00313 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Chy09g00313 320 Gene3D - 27 316 - -
Chy09g00313 320 PANTHER - 5 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Chy09g00313 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Chy09g00313 320 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 Gene3D Peroxidase, domain 2 163 300 - -
Chy09g00313 320 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g00313 320 PANTHER PEROXIDASE 31 5 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00313 Chy-Chr9:2677518 Chy06g00900 Chy-Chr6:6580789 1.66E-87 dispersed
Chy02g00854 Chy-Chr2:5455470 Chy09g00313 Chy-Chr9:2677518 3.76E-97 transposed
Chy03g01119 Chy-Chr3:14496442 Chy09g00313 Chy-Chr9:2677518 1.14E-19 transposed
Chy04g00298 Chy-Chr4:2695692 Chy09g00313 Chy-Chr9:2677518 7.86E-86 transposed
Chy11g00234 Chy-Chr11:2187809 Chy09g00313 Chy-Chr9:2677518 9.75E-96 transposed
Chy11g01292 Chy-Chr11:19096808 Chy09g00313 Chy-Chr9:2677518 2.59E-15 transposed
Chy12g01291 Chy-Chr12:17389527 Chy09g00313 Chy-Chr9:2677518 7.17E-134 wgd
Chy02g02553 Chy-Chr2:28790326 Chy09g00313 Chy-Chr9:2677518 7.12E-125 wgd
Chy04g01488 Chy-Chr4:21546024 Chy09g00313 Chy-Chr9:2677518 5.13E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00313 K00430 - csv:105435603 608.216