Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00320 ATGGCGTTAACTGGAAGAAGCTTAATGGAAGGAGTTCTTCCATTTCCGGCGATGATGTCGATGGAGTGTATAAACGTCGGTCTCAACACACTTTTTAAAGCCGCCACTGCCGCCGGGATGAGCCACCACGTGTTCGTCGTTTACTCTTACTCTTTCGCCGCCCTTCTGCTCCTCCCTTCTCCTTTCATCTCTCGAAGATCCACTCGCCTTCCACCTCTCAATTTCTCCGTAATTTCAAAGATTGCTCTGCTTGGAGTAATCGGTTCTTGTTCGCAGATCATGGGATACACAGGAATCAATTATAGTTCTCCAACGCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTTGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACAATAATATCAATATCAGGGGCATTTGTGGTAACATTTTACAAGGGTCCAAGAATCATATTCTCATCTTCACCAACCATTTCTCTTTCACTTCATCACAATTCACAGCAACTATCCTCTTCTGATTCTAATTGGGTTATTGGTAGCCTTCTCTTGACTGCTGAATATATCCTTGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGGTCTTCTTCTACAACTTAACTGTGGCCATCATAGCTGCATTTGTAGGTTTGATTTTAGAGAAAGATCCAAGTGCTTGGATTTTGAGGCAAAATACATCATTAGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGTTTAAACAATACAGTTCATACATGGGCACTCCGATTGAAAGGGCCGGTGTTCGTAGCAATGTTTAAGCCGTTGTCGATTGTTGTTGCTATCGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGAAAAGCAAAAGAAGAAATGGGTGTTGGAGAAAAACAAGAAGGCCATAGCCATAATAATCTCGATGGTAACAAGGAATCAAATGAAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACAGATACAGTGAAGATCATGCGATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGAAATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCTCGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGTCTTTATCGTCAATTGGCAGCCTTCCCAGTGACAACAACATTCTCTTCCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCTCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAAGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGGGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGA 1680 42.62 MALTGRSLMEGVLPFPAMMSMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISRRSTRLPPLNFSVISKIALLGVIGSCSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTFYKGPRIIFSSSPTISLSLHHNSQQLSSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVVFFYNLTVAIIAAFVGLILEKDPSAWILRQNTSLASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKAKEEMGVGEKQEGHSHNNLDGNKESNEDQRVPLLGSYNRYSEDHAMSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCSVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA* 560
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 2737732 2746664 - Chy9G160360.1 Chy09g00320 233217
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00320 559 MobiDBLite consensus disorder prediction 338 358 - -
Chy09g00320 559 SUPERFAMILY LigT-like 381 530 IPR009097 -
Chy09g00320 559 Pfam EamA-like transporter family 26 155 IPR000620 GO:0016020|GO:0016021
Chy09g00320 559 Pfam EamA-like transporter family 202 328 IPR000620 GO:0016020|GO:0016021
Chy09g00320 559 Gene3D Cyclic phosphodiesterase 382 554 - -
Chy09g00320 559 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 332 - -
Chy09g00320 559 Pfam 2'-5' RNA ligase superfamily 417 531 - -
Chy09g00320 559 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 158 - -
Chy09g00320 559 PANTHER WAT1-RELATED PROTEIN 11 345 IPR030184 GO:0016021|GO:0022857
Chy09g00320 559 PANTHER WAT1-RELATED PROTEIN 11 345 - -
Chy09g00320 559 MobiDBLite consensus disorder prediction 338 359 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Chy09g00320 Chy10g00923 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01479 Chy-Chr4:21444995 Chy09g00320 Chy-Chr9:2737732 7.24E-91 dispersed
Chy09g00320 Chy-Chr9:2737732 Chy04g01678 Chy-Chr4:23148707 4.38E-56 dispersed
Chy09g00320 Chy-Chr9:2737732 Chy09g00321 Chy-Chr9:2758108 3.14E-79 tandem
Chy10g00923 Chy-Chr10:14895853 Chy09g00320 Chy-Chr9:2737732 1.03E-69 wgd
Chy04g01478 Chy-Chr4:21426457 Chy09g00320 Chy-Chr9:2737732 3.20E-92 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00320 - - csv:101208880 694.501