Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00332 ATGAGGACTTCTTTTCACTCGCATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAAAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCTGTAAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGACGGTTCAACCGTGATCGACAGTGGAAGAACACGAGGGTCAGGAGCCATCGCGCTAGTTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGGTGGACATATGTGCTAAGGTTTGCCTTATTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCCATAATTGCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACACATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAAAAATTTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTAGGTCATGGCGTTGAAGACGATCTCAAACGCTTACAAATCGGTTACCCATCCTTCATGATAAGGGACACAGCAAATTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCACTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACCAGTTCATAGGAAAGAGAACTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTAAGGAATTGA 951 40.17 MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRGSGAIALVCKYVGGGSDGSVDICAKVCLIDEGENVIFYSYVKPIIAVTNYRYETTGIRPEHIRDAMPMKQVQKKFQEILYNGGEKARILVGHGVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSPVHRKENYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRN* 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2883468 2887577 - Chy9G160480.1 Chy09g00332 233229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00332 316 PANTHER OS02G0709000 PROTEIN 1 313 - -
Chy09g00332 316 Gene3D - 101 280 IPR036397 GO:0003676
Chy09g00332 316 SUPERFAMILY Ribonuclease H-like 117 264 IPR012337 -
Chy09g00332 316 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 313 - -
Chy09g00332 316 CDD REX4_like 104 259 IPR037431 GO:0006364|GO:0008408
Chy09g00332 316 Pfam Exonuclease 121 236 IPR013520 -
Chy09g00332 316 SMART exoiiiendus 102 267 IPR013520 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00046 Chy-Chr7:422745 Chy09g00332 Chy-Chr9:2883468 4.23E-22 dispersed
Chy09g00331 Chy-Chr9:2868963 Chy09g00332 Chy-Chr9:2883468 1.90E-46 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00332 - - csv:101218614 635.18