Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g00338 | ATGGAGAATCCTTCAGAAAAAAAGTATCCAGTGAATGCCAAGGATTATAACTTACATGAAGAAGTTGGTGAAGGCGTCAGTGCCACTGTGTACAAGGCACTGTGCATTCCGCTAAATGAGATTGTCGCTATAAAGGTTCTTGATTTGGAGAAGTGCAACAATGACCTAGATGGTATTCGGCGAGAGGTTCAAACAATGACTTTGATTGATCATCCAAATTTGTTAAGAGCACATTGTTCCTTCACTGCTGGTCACCACCTTTGGGTTGTGATGCCGTACATGTCAGGGGGATCTTGTCTTCATATTATGAAATCTGCTTATTCGGAAGGTTTTGATGAGCCTGTCATAGCTACCCTATTGCGGGAGGTTCTGAAGGCTCTTGTTTATCTTCATGCTCATGGCCACATCCATAGAGATGTGAAGGCTGGGAATATTTTGCTTGATTCTAATGGTACAGTCAAATTAGCGGATTTTGGAGTCTCAGCTTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACGTTTGTCGGAACTCCTTGCTGGATGGCACCTGAAGTTATGCAGCAATTACACGGATATGACTTCAAGGCAGACATTTGGTCGTTTGGAATAACAGCACTTGAATTGGCTCATGGACATGCTCCATTTTCAAAATACCCACCGATGAAAGTTTTGCTAATGACACTACAAAATGCTCCGCCTGGTCTTGACTATGAAAGAGATAGGAGATTTTCTAAGTCGTTCAAAGAAATGGTTGCTACATGTTTAGTGAAGGATCCAAAGAAACGGCCAAGTTCTGAGAAGCTCCTAAAACACCCTTTTTTTAAACATGCTCGTTCAGTTGATTACCTTGCTCGAACAATCCTGGATGGCCTTGATCCATTAGGGGATCGCTTTAAGAAGCTAAAGGCAAAAGAGGCTGATCTTCTGGGACAAAACAAAGCTTTGTATGGGGACAAGGAGCATTTATCACAGCAAGAGTATATTCGAGGAATTAGTGCCTGGAACTTCAACCTTGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGATGATATGTCAAACATAGAAGATCTAGATGTACATACTACACAACAAAGAAACAAGAATAATGAGTTTACCTTTCCGGTAGAGGGTTCATCCCTTGAAAGGCTGAGTCACCCTACTGCTGCAGCTAGTCAGGAGGATGGTTTCAATGATCTTCATGATTTGGAGAGTTCCCTTGCTTCTTTCCCTATGAAACCTCTTGAAGCACTCAAAGATTGTTTTGACATCTATGAAGATATAAGCACAGACAGTGTAAGGCCAGTGGATAGAGAAAATGGAAGAACTGAGGGTGAGAGTTCAGGGCAAAGTGGTTCTTTACCACGTCATTATATGTCAGAGAATAAGAGATCTTTCAGTGGTTCACTAATTTCTGACAATGCTGTATCTCCTAAAAAGATTACTGTAGATGGTGATAGGGACTATTTGCAGTCAAAACTTCCATCTGAGCGCAATTACAGTGGTCCACTATTATATCGCCAGAAAAGGGATACAAATAATGTTTCATCTGTTGACGATGCATCAGATGGAACAGTTGTTCAGCGCAAGGGGCGGTTTAAAGTTACTTCAGCAGAGCTTAGTCCAAAGGGTCCTATGACGGGCTCATTTAGCCCAGTCTGTGGAGGGACAATAAGTCCAACATCTCTGAACCTCACACCTGCTCTACTCCTCCCATCAATGCAATGCATTTTGCAGCAGAACATTGTTCAACGGGAAGAAATTCTTAAACTGATCAAGTGTTTGGAACAAATGACTGGCAAGAATCCAGATGCATCAGAGTCGGTCACCAGTGACCTTCTGCAGGTACCACCAACTTCCTTGAGGGAAAGAGAGTTGCAATCTCAGGTCGTTCATCTGCAGCAGAGTTTCTGTTTTCCTTTTCTTCTTATAACGATACGTCAAACCGAACCTACAATATTACCATTCTTGCATCCACGACCTGTGGCCATGTCGCTTGGGCTCGGTGCATAA | 2025 | 42.52 | MENPSEKKYPVNAKDYNLHEEVGEGVSATVYKALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLIDHPNLLRAHCSFTAGHHLWVVMPYMSGGSCLHIMKSAYSEGFDEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILLDSNGTVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVATCLVKDPKKRPSSEKLLKHPFFKHARSVDYLARTILDGLDPLGDRFKKLKAKEADLLGQNKALYGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNIEDLDVHTTQQRNKNNEFTFPVEGSSLERLSHPTAAASQEDGFNDLHDLESSLASFPMKPLEALKDCFDIYEDISTDSVRPVDRENGRTEGESSGQSGSLPRHYMSENKRSFSGSLISDNAVSPKKITVDGDRDYLQSKLPSERNYSGPLLYRQKRDTNNVSSVDDASDGTVVQRKGRFKVTSAELSPKGPMTGSFSPVCGGTISPTSLNLTPALLLPSMQCILQQNIVQREEILKLIKCLEQMTGKNPDASESVTSDLLQVPPTSLRERELQSQVVHLQQSFCFPFLLITIRQTEPTILPFLHPRPVAMSLGLGA* | 675 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2955913 | 2964998 | + | Chy9G160540.1 | Chy09g00338 | 233235 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g00338 | 674 | SMART | serkin_6 | 16 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy09g00338 | 674 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 1 | 640 | - | - | |
Chy09g00338 | 674 | Gene3D | Transferase(Phosphotransferase) domain 1 | 97 | 309 | - | - | |
Chy09g00338 | 674 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 1 | 640 | - | - | |
Chy09g00338 | 674 | Pfam | Protein kinase domain | 16 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy09g00338 | 674 | ProSiteProfiles | Protein kinase domain profile. | 16 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy09g00338 | 674 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 278 | IPR011009 | - | |
Chy09g00338 | 674 | CDD | STKc_OSR1_SPAK | 14 | 277 | - | - | |
Chy09g00338 | 674 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 45 | IPR017441 | GO:0005524 | |
Chy09g00338 | 674 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 92 | - | - | |
Chy09g00338 | 674 | MobiDBLite | consensus disorder prediction | 449 | 464 | - | - | |
Chy09g00338 | 674 | MobiDBLite | consensus disorder prediction | 437 | 464 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01331 | Chy-Chr4:19856048 | Chy09g00338 | Chy-Chr9:2955913 | 0 | dispersed | |
Chy05g00345 | Chy-Chr5:3557828 | Chy09g00338 | Chy-Chr9:2955913 | 1.67E-48 | dispersed | |
Chy06g02217 | Chy-Chr6:26332925 | Chy09g00338 | Chy-Chr9:2955913 | 0 | dispersed | |
Chy07g00059 | Chy-Chr7:518162 | Chy09g00338 | Chy-Chr9:2955913 | 3.02E-70 | dispersed | |
Chy09g00338 | Chy-Chr9:2955913 | Chy04g01198 | Chy-Chr4:18401444 | 4.39E-43 | dispersed | |
Chy09g00338 | Chy-Chr9:2955913 | Chy06g00495 | Chy-Chr6:3358171 | 1.85E-109 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71458 | PF00069 | Pkinase | 4.30E-60 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g00338 | K08835 | - | csv:101205102 | 1283.47 |