Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00338 ATGGAGAATCCTTCAGAAAAAAAGTATCCAGTGAATGCCAAGGATTATAACTTACATGAAGAAGTTGGTGAAGGCGTCAGTGCCACTGTGTACAAGGCACTGTGCATTCCGCTAAATGAGATTGTCGCTATAAAGGTTCTTGATTTGGAGAAGTGCAACAATGACCTAGATGGTATTCGGCGAGAGGTTCAAACAATGACTTTGATTGATCATCCAAATTTGTTAAGAGCACATTGTTCCTTCACTGCTGGTCACCACCTTTGGGTTGTGATGCCGTACATGTCAGGGGGATCTTGTCTTCATATTATGAAATCTGCTTATTCGGAAGGTTTTGATGAGCCTGTCATAGCTACCCTATTGCGGGAGGTTCTGAAGGCTCTTGTTTATCTTCATGCTCATGGCCACATCCATAGAGATGTGAAGGCTGGGAATATTTTGCTTGATTCTAATGGTACAGTCAAATTAGCGGATTTTGGAGTCTCAGCTTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACGTTTGTCGGAACTCCTTGCTGGATGGCACCTGAAGTTATGCAGCAATTACACGGATATGACTTCAAGGCAGACATTTGGTCGTTTGGAATAACAGCACTTGAATTGGCTCATGGACATGCTCCATTTTCAAAATACCCACCGATGAAAGTTTTGCTAATGACACTACAAAATGCTCCGCCTGGTCTTGACTATGAAAGAGATAGGAGATTTTCTAAGTCGTTCAAAGAAATGGTTGCTACATGTTTAGTGAAGGATCCAAAGAAACGGCCAAGTTCTGAGAAGCTCCTAAAACACCCTTTTTTTAAACATGCTCGTTCAGTTGATTACCTTGCTCGAACAATCCTGGATGGCCTTGATCCATTAGGGGATCGCTTTAAGAAGCTAAAGGCAAAAGAGGCTGATCTTCTGGGACAAAACAAAGCTTTGTATGGGGACAAGGAGCATTTATCACAGCAAGAGTATATTCGAGGAATTAGTGCCTGGAACTTCAACCTTGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGATGATATGTCAAACATAGAAGATCTAGATGTACATACTACACAACAAAGAAACAAGAATAATGAGTTTACCTTTCCGGTAGAGGGTTCATCCCTTGAAAGGCTGAGTCACCCTACTGCTGCAGCTAGTCAGGAGGATGGTTTCAATGATCTTCATGATTTGGAGAGTTCCCTTGCTTCTTTCCCTATGAAACCTCTTGAAGCACTCAAAGATTGTTTTGACATCTATGAAGATATAAGCACAGACAGTGTAAGGCCAGTGGATAGAGAAAATGGAAGAACTGAGGGTGAGAGTTCAGGGCAAAGTGGTTCTTTACCACGTCATTATATGTCAGAGAATAAGAGATCTTTCAGTGGTTCACTAATTTCTGACAATGCTGTATCTCCTAAAAAGATTACTGTAGATGGTGATAGGGACTATTTGCAGTCAAAACTTCCATCTGAGCGCAATTACAGTGGTCCACTATTATATCGCCAGAAAAGGGATACAAATAATGTTTCATCTGTTGACGATGCATCAGATGGAACAGTTGTTCAGCGCAAGGGGCGGTTTAAAGTTACTTCAGCAGAGCTTAGTCCAAAGGGTCCTATGACGGGCTCATTTAGCCCAGTCTGTGGAGGGACAATAAGTCCAACATCTCTGAACCTCACACCTGCTCTACTCCTCCCATCAATGCAATGCATTTTGCAGCAGAACATTGTTCAACGGGAAGAAATTCTTAAACTGATCAAGTGTTTGGAACAAATGACTGGCAAGAATCCAGATGCATCAGAGTCGGTCACCAGTGACCTTCTGCAGGTACCACCAACTTCCTTGAGGGAAAGAGAGTTGCAATCTCAGGTCGTTCATCTGCAGCAGAGTTTCTGTTTTCCTTTTCTTCTTATAACGATACGTCAAACCGAACCTACAATATTACCATTCTTGCATCCACGACCTGTGGCCATGTCGCTTGGGCTCGGTGCATAA 2025 42.52 MENPSEKKYPVNAKDYNLHEEVGEGVSATVYKALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLIDHPNLLRAHCSFTAGHHLWVVMPYMSGGSCLHIMKSAYSEGFDEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILLDSNGTVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVATCLVKDPKKRPSSEKLLKHPFFKHARSVDYLARTILDGLDPLGDRFKKLKAKEADLLGQNKALYGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNIEDLDVHTTQQRNKNNEFTFPVEGSSLERLSHPTAAASQEDGFNDLHDLESSLASFPMKPLEALKDCFDIYEDISTDSVRPVDRENGRTEGESSGQSGSLPRHYMSENKRSFSGSLISDNAVSPKKITVDGDRDYLQSKLPSERNYSGPLLYRQKRDTNNVSSVDDASDGTVVQRKGRFKVTSAELSPKGPMTGSFSPVCGGTISPTSLNLTPALLLPSMQCILQQNIVQREEILKLIKCLEQMTGKNPDASESVTSDLLQVPPTSLRERELQSQVVHLQQSFCFPFLLITIRQTEPTILPFLHPRPVAMSLGLGA* 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2955913 2964998 + Chy9G160540.1 Chy09g00338 233235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00338 674 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00338 674 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 640 - -
Chy09g00338 674 Gene3D Transferase(Phosphotransferase) domain 1 97 309 - -
Chy09g00338 674 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 640 - -
Chy09g00338 674 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00338 674 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00338 674 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Chy09g00338 674 CDD STKc_OSR1_SPAK 14 277 - -
Chy09g00338 674 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Chy09g00338 674 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Chy09g00338 674 MobiDBLite consensus disorder prediction 449 464 - -
Chy09g00338 674 MobiDBLite consensus disorder prediction 437 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01331 Chy-Chr4:19856048 Chy09g00338 Chy-Chr9:2955913 0 dispersed
Chy05g00345 Chy-Chr5:3557828 Chy09g00338 Chy-Chr9:2955913 1.67E-48 dispersed
Chy06g02217 Chy-Chr6:26332925 Chy09g00338 Chy-Chr9:2955913 0 dispersed
Chy07g00059 Chy-Chr7:518162 Chy09g00338 Chy-Chr9:2955913 3.02E-70 dispersed
Chy09g00338 Chy-Chr9:2955913 Chy04g01198 Chy-Chr4:18401444 4.39E-43 dispersed
Chy09g00338 Chy-Chr9:2955913 Chy06g00495 Chy-Chr6:3358171 1.85E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71458 PF00069 Pkinase 4.30E-60 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00338 K08835 - csv:101205102 1283.47