Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00348 ATGTGGAATAACGCTGTAATGGCTTTGGCTATGTCGTTTTCCCCTAATTCTATTGCTACGGCTACTGCGGCTATTCCATGCCCTAACCGAAGCCCCAATTTCCCTCACTTTTCGCACATTCTTCATTTCCGTTCTCACGAATCAATTCCATGGCGTTCTTCTTCTTCTTCTTCTTCATCGATCTCTGGTTCTTCGTTTGGATTTACTCCGAGGTTTGAGAAATTTGTTGTAATGGCTGCTTCCTCCGTGCCGGAGAGTGCTGGGGAGGGTGTGGAATCGGTTGATTTGGTTCAGAATCTCCGGCTTGGTGCAATGTTTGGGATTTGGTATCTTTTGAATATCTACTACAATATTTTCAACAAACAGGTTTTGAAAGCCTTTCCGTTTCCAACTACGGTGACAGCTTTCCAGTTCGGTTGTGGTACGATCATAGTAAACTTAATGTGGGCTCTTAATTTTCATCACAGACCCAAGATCAGTTCATCCCAGTTTGCTACCATTCTTCCACTGGCTGTAGCGCACACAATGGGAAACATATTAACCAATGTGAGTCTTGGGAGAGTTGCGGTTTCATTTACTCACACCATCAAAGCAATGGAGCCATTTTTCACTGTCCTTCTCTCTGCTTTGTTTTTGGCTGAGAGGCCCAGTTTTTGGGTTGTTTTTTCTCTGGTTCCCGTTGTAGGAGGAGTGGCACTCGCTTCTTTTTCTGAAGCCTCATTTAATTGGATTGGCTTCAGCAGTGCCATGGCTTCAAATCTTACCAATCAATCACGTAATATCTTCAGCAAAAAGTTCATGGTCCACAAAGAGGCACTGGACAACATCAATTTGTTCTCTGTAATTACCATCATTTCGTTTATCCTGCTGGTTCCCTCGGCTCTTCTCCTTGAAGGCACTAAATTTAGTCCTTCATACTTGAAATTAGCTGCAAATCAAGGGTTGAATATTAGAGAACTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTTCATAGTTATCAGCAGGTTTCATATTCAATACTACAAGAAATTTCACCGGTGACCCATGCAGTAGGAAATTCTTTGAAGCGAGTGGTGGTTATAGTGTCTTCGGTTATTTTCTTCCAAACAACAGTCTCACCTCTAAACGCCCTTGGAACGGGCATAGCTCTAATGGGAGTTTTCTTGTACTCAAGGGCTAAGCGTATGAACTCAAAACTCAAGTCTTTGTAA 1215 42.55 MWNNAVMALAMSFSPNSIATATAAIPCPNRSPNFPHFSHILHFRSHESIPWRSSSSSSSSISGSSFGFTPRFEKFVVMAASSVPESAGEGVESVDLVQNLRLGAMFGIWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFGCGTIIVNLMWALNFHHRPKISSSQFATILPLAVAHTMGNILTNVSLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPSFWVVFSLVPVVGGVALASFSEASFNWIGFSSAMASNLTNQSRNIFSKKFMVHKEALDNINLFSVITIISFILLVPSALLLEGTKFSPSYLKLAANQGLNIRELCIRLLLSGICFHSYQQVSYSILQEISPVTHAVGNSLKRVVVIVSSVIFFQTTVSPLNALGTGIALMGVFLYSRAKRMNSKLKSL* 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3036670 3045566 - Chy9G160640.1 Chy09g00348 233245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00348 404 Pfam Triose-phosphate Transporter family 100 392 IPR004853 -
Chy09g00348 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 238 - -
Chy09g00348 404 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 43 398 - -
Chy09g00348 404 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 100 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
Chy09g00348 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 317 396 - -
Chy09g00348 404 PANTHER SOLUTE CARRIER FAMILY 35 43 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00348 Chy-Chr9:3036670 Chy10g01056 Chy-Chr10:15739628 8.82E-62 dispersed
Chy12g01264 Chy-Chr12:17224495 Chy09g00348 Chy-Chr9:3036670 3.90E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00348 K15283 - csv:101217436 761.525