Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00366 ATGGGGTCCGGTAATGAGTTATGTTCACAAGAGTTTGATTTGGATGCTAAGTGGCTGGTCGATCCGAAGCAAATCTTTGTTGGGCCAAGGATTGGGGAGGGCGCGCATGGCAAAGTGCACAAGGGGAAATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAGCCCCAGAAGAAATTGCGAAAACGGAGGCACGCTTTGCTCGGGAGGTCGCTATGTTATCCAAAGTTCAACACAAGAATCTTGCAAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTAACCGAGCTTCTTTCAGGCGGAACTTTACGGAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAGTGAGGCAGTTGGCTTTGCACTTGATATTGCCCGTGCAATGGATTGCTTGCATTCCCATGGGATCATTCACCGTGACCTCAAACCTGAGAATTTGATCTTGACCGCAGATCACAAAACTGTTAAACTTGCTGATTTTGGCCTTGCTAGAGAAGAGTCGGTAACAGAGATGATGACAGCTGAAACTGGGACTTACAGATGGATGGCTCCAGAGCTATACAGTACAGTCACTCTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGATTATCCAAAACAAGTTGCCTTTTGAAGGCATGTCAAATCTACAAGCCGCATATGCGGCTGCTTTTAAGAATTTACGACCAAGTGCCGAGAACCTCCCAGCGGATTTGGCACCAATTGTGACTTCCTGTTGGAAAGAGGATCCGAATGATCGGCCTAACTTCAACCAAATCATACAGATGCTCTTGAAATGTCTATCCACCATTCCACAACCAGAATATGTTCCACCACCAACTATGCACCCACCTGATAATGCAGTGCTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAACCACAAGACGTGGCACCGGGGAAGTCATGAACAGTGAAATAGGAGATAAACCAACCGGTTTCTTCTCGTGTTTCGCTGGTAACTGTTACTGA 1062 45.39 MGSGNELCSQEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHKGKYKDQNVAIKIIRKGEAPEEIAKTEARFAREVAMLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLLKCLSTIPQPEYVPPPTMHPPDNAVLPPESPGTSSLMATTRRGTGEVMNSEIGDKPTGFFSCFAGNCY* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3200310 3203241 + Chy9G160820.1 Chy09g00366 233263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00366 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Chy09g00366 353 PANTHER BNAA06G32000D PROTEIN 1 328 - -
Chy09g00366 353 Pfam Protein tyrosine and serine/threonine kinase 29 285 IPR001245 GO:0004672|GO:0006468
Chy09g00366 353 CDD STKc_MAP3K-like 31 285 - -
Chy09g00366 353 SMART serkin_6 25 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00366 353 Gene3D Phosphorylase Kinase; domain 1 13 104 - -
Chy09g00366 353 PANTHER SERINE-THREONINE PROTEIN KINASE 1 328 - -
Chy09g00366 353 ProSitePatterns Protein kinases ATP-binding region signature. 31 56 IPR017441 GO:0005524
Chy09g00366 353 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672|GO:0006468
Chy09g00366 353 PRINTS Tyrosine kinase catalytic domain signature 213 235 IPR001245 GO:0004672|GO:0006468
Chy09g00366 353 PRINTS Tyrosine kinase catalytic domain signature 139 157 IPR001245 GO:0004672|GO:0006468
Chy09g00366 353 PRINTS Tyrosine kinase catalytic domain signature 101 114 IPR001245 GO:0004672|GO:0006468
Chy09g00366 353 ProSiteProfiles Protein kinase domain profile. 25 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00366 353 Gene3D Transferase(Phosphotransferase) domain 1 105 296 - -
Chy09g00366 353 SUPERFAMILY Protein kinase-like (PK-like) 17 316 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01420 Chy09g00366 CCT
Chy04g01420 Chy09g00366 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00667 Chy-Chr2:4044918 Chy09g00366 Chy-Chr9:3200310 3.93E-94 dispersed
Chy04g02309 Chy-Chr4:27546469 Chy09g00366 Chy-Chr9:3200310 1.36E-148 dispersed
Chy09g00366 Chy-Chr9:3200310 Chy05g00823 Chy-Chr5:11816512 9.58E-76 dispersed
Chy02g02618 Chy-Chr2:29333915 Chy09g00366 Chy-Chr9:3200310 0 wgd
Chy04g01420 Chy-Chr4:20838762 Chy09g00366 Chy-Chr9:3200310 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71459 PF07714 PK_Tyr_Ser-Thr 5.40E-59 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00366 - - csv:101220915 716.842