Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00382 ATGGGTGGTGTTACTTCGTCCATGGCGGCGAAATTAGCTTTTTTCCCGCCGAACCCGCCTTCTTACAAACTTGTTAACGATGAATATACGGGTCTTTTGCTTCTTACCCCTTTTCCTCATCGTGAAAACGTTGAGATCCTTAAGTTGCCTACTCGTCGTGGTACTGAGGTTGTTGCCGTTTTCATTCGTTACCCTATGGCGACCTCGACTTTGCTATATTCTCATGGAAACGCTGCTGATCTGGGTCAGATGTATGAGCTTTTCATTGAATTAAGCATTCATCTTCGAGTTAACCTCATGGGGTATGACTATTCAGGGTATGGACAATCATCTGGAAAGCCAACTGAGCAGAATACATATGCAGATATTGAAGCTGTATACAAGTGTCTTGAAGAAAGTTATGGTATTAAGCAGGAAGATATCATTCTATATGGTCAATCGGTTGGAAGTGGCCCAACTTTGGATCTTGCAGCGCGGCTGCCTCTCTTAAGAGCTGTAGTTCTTCATAGTCCAATACTTTCTGGTTTAAGAGTCATGTATCCAGTCAAGCGTTCGTATTGGTTCGACATTTATAAGAACATTGACAAAATTCCCTTGGTTGATTGCCCTGTTCTTATCATCCACGGAACTTCAGATGATGTGGTTGATTGCTCACATGGTAAGCAACTTTGGGAACTATGCAAAGAAAAGTATGAACCATTGTGGATTAAAGGAGGAAACCATTGTGATTTGGAGCTCTATCCTGAGTATATCAAGCACTTGAAAAAGTTCATATCAACAGTGGAGAAGTCCCCATCCCAGAGGTACAGTTCCAGGAAGAGCACGGATCAGATTGAGAAACCTCGAAGGAGTGTAGAGTTTTTCGAAGTTTCGAGGAAGAGCACAGATAGGCGAGAGAAACCAAGGCAAAGCACTGATAGGCCTGAAAAAATGAAGAACCAATACGGTAATACAGATAAATTAGAAAAAGTGAGAATGTCGGTCGACCATAAAGAAAGGTCACGTAGGAGTGTTGATTGCCATGAGAAGTCAAGAAAAAGTGTTGATCACCAGTTGGAACGAGCAAGAAAGAGTGTTGATCGGCTTGACAGAATACACACTGGATAA 1107 42.28 MGGVTSSMAAKLAFFPPNPPSYKLVNDEYTGLLLLTPFPHRENVEILKLPTRRGTEVVAVFIRYPMATSTLLYSHGNAADLGQMYELFIELSIHLRVNLMGYDYSGYGQSSGKPTEQNTYADIEAVYKCLEESYGIKQEDIILYGQSVGSGPTLDLAARLPLLRAVVLHSPILSGLRVMYPVKRSYWFDIYKNIDKIPLVDCPVLIIHGTSDDVVDCSHGKQLWELCKEKYEPLWIKGGNHCDLELYPEYIKHLKKFISTVEKSPSQRYSSRKSTDQIEKPRRSVEFFEVSRKSTDRREKPRQSTDRPEKMKNQYGNTDKLEKVRMSVDHKERSRRSVDCHEKSRKSVDHQLERARKSVDRLDRIHTG* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3369843 3372512 + Chy9G160980.1 Chy09g00382 233279

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00382 368 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 324 364 - -
Chy09g00382 368 Pfam alpha/beta hydrolase fold 71 171 IPR000073 -
Chy09g00382 368 MobiDBLite consensus disorder prediction 289 368 - -
Chy09g00382 368 SUPERFAMILY alpha/beta-Hydrolases 12 262 IPR029058 -
Chy09g00382 368 Gene3D alpha/beta hydrolase 43 258 IPR029058 -
Chy09g00382 368 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 1 314 - -
Chy09g00382 368 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 324 364 - -
Chy09g00382 368 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 1 314 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00382 K01076 ABHD17; abhydrolase domain-containing protein 17 [EC:3.1.2.22] - csv:101218547 731.095
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Chy06g01497 Chy09g00382 CCT
Chy06g01497 Chy09g00382 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01497 Chy-Chr6:16379027 Chy09g00382 Chy-Chr9:3369843 0 dispersed
Chy02g02098 Chy-Chr2:25267349 Chy09g00382 Chy-Chr9:3369843 6.94E-132 transposed
Chy03g00863 Chy-Chr3:11841316 Chy09g00382 Chy-Chr9:3369843 7.96E-146 transposed
Chy09g00176 Chy-Chr9:1495756 Chy09g00382 Chy-Chr9:3369843 0 transposed
Chy02g02632 Chy-Chr2:29419565 Chy09g00382 Chy-Chr9:3369843 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1004 . . . Bda11g01164 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone9ag0516 . . . . . . . Bda11g01164 . . . . . Cmo04g02953 . . . . Car15g00221 Cpe13g00994 . . . . . . . . . . . . . . . . . Chy09g00382 .
Vvi14g1257 Blo10g00427 . . . . . . Bma13g00565 . . . . Car11g01336 . Sed01g3635 . . Bhi06g00593 Tan11g0680 Cmetu09g1176 . Hepe02g3061 . Lcy10g1884 . . . . . . . . . . . Lsi02g01609 Csa05g01872 Chy06g01497 . . . . . Bpe09g00527 . . . . Cmo04g02797 . Cma04g02668 . . . . Cpe01g02316 . . . . . . . Cla09g01897 Cam09g1994 Cec09g2055 Cco09g2151 . . . . . Chy09g00382 Cme09g00448
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000437 3 6 3 3 4 4 5 4 4 4 3 4 5 4 4 4 4 6 3 4 4 4 4 4 4 2 4 6 4 4 121
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy09g00382 Chy_Chr09 FPKM 0.32636 0.464852 0.0 0.0 1.475237 1.651165 1.382551 0.0 0.0 0.177849