Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00415 ATGGAAATTATAGGAAAAACTGGGTTACTGTTTAGTCTGGCTTTGCTTTGGTTATGGGCTTTTTCAAGTGAGGCTTCAACAAGCAAAGATCTTACTGCTGAAGTTCAAGCTTTGATGGGGATCAAAGCTGGTTTGAAGGATCCTCATTCTGTTCTGAGTTGGGATGAAAATGCTGTGGATGCATGTACTTGGAATTTCATCACTTGCTCTCCTGATAAACTGGTCATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGTACACTCTCACCAAGTATTGCAAATTTGACAAACCTTCAATTTTTGCTTCTTCAGAATAACAATATTTCAGGAAAAATCCCCAAAGAGGTTACCAAAATAACAAAACTTCACACACTTGATCTTTCAAACAACTCGTTCTCTGGTGAAATTCCCAGCTCTTTCTCCAATACGAAAAGCCTTCAATACCTGCGACTCAACAATAACACTTTATCAGGGCCAATCCCAATATCACTGGCTAACATGACCCAGCTTACGCTGCTGGACTTGTCCTATAATAACTTGAGCAGTCCTGTGCCCAGATTGCTGGCTAAGACATTTAACTTTACTGGAAACTCTTTGATTTGTTCCCCTGGAACTAAGGAAGTATGCTATGGAACAACTCCGTTGCCACTTTCTTTTGCTCTTCCTAATTCCACATATTCTCAACCTCCTAGGAGACACAGTGGCCAGAGAATTGCTTTAGTTATTGGTCTCAGCTTGAGCTGCATCTGTCTCTTCACTCTTGCATATGGTTTCTTTAGCTGGCGGAAGCATAGGCACAATCAACAAATATTCTTTGAAGCTAATGATTGGCATCGGGACGATCATAGCCTAGGGAACATAAAGAGGTTTCAGTTCAGAGAACTTCAGAATGCTACTCACAATTTCAGCAGTAAAAACTTGGTTGGAAAAGGTGGTTTTGGAAATGTATACAGAGGATATCTACAAGATGGCACCATTGTAGCTGTAAAGAGACTCAAAGATGGAAATGCTATGAGAGGAGAGATCCAGTTTCAGACTGAAGTTGAAATGATAAGCTTGGCAGTGCATAGGAACCTTCTCAGGTTATATGGTTTCTGTATGACAGAAACCGAAAGGCTTTTGGTCTATCCCTACATGTCCAATGGCAGTGTTGCAACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCCAGGGGATTGTTATACCTACATGAACAGTGTGATCCAAAAATAATCCATAGGGATGTGAAAGCTGCAAATATACTTCTTGATGATTTCTGTGAGGCAGTGGTGGGTGATTTTGGGCTGGCAAAGCTGTTAGATCACAGAGATTCACATGTCACTACTGCAGTTAGGGGAACCGTTGGGCACATTGCACCAGAGTATCTATCAACAGGCCAATCCTCAGAGAAAACAGATGTTTTTGGGTTCGGAATTCTACTTCTTGAGCTCATATCGGGTCAAAGAGCTCTCGAGTTTGGTAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTAAAGAAGATACACCAAGAAAAGAAGCTTGAAATGATTGTTGACAAAGACTTGAGAAGTAATTACGACCGAATCGAACTTGAAGAAATTGTTCGAGTTGCTCTCTTGTGCATTCAATATCTTCCAAGCCATAGGCCTAAGATGTCTGAAGTGGTCAGGATGCTTGAAGGAGATGGACTTGCTGAGAAATGGGAAGCGTCCCAAAGAGCAGAAGCAAGCAGGAGCAGAGCCAATGACTTCTCCTCTTCAGAACGTTACTCTGATCTTACTGATGACTCTTCATTGTTTGCCCAAGCGATAGAGCTCTCAGGACCAAGATAA 1872 42.25 MEIIGKTGLLFSLALLWLWAFSSEASTSKDLTAEVQALMGIKAGLKDPHSVLSWDENAVDACTWNFITCSPDKLVIGIGAPSQNFSGTLSPSIANLTNLQFLLLQNNNISGKIPKEVTKITKLHTLDLSNNSFSGEIPSSFSNTKSLQYLRLNNNTLSGPIPISLANMTQLTLLDLSYNNLSSPVPRLLAKTFNFTGNSLICSPGTKEVCYGTTPLPLSFALPNSTYSQPPRRHSGQRIALVIGLSLSCICLFTLAYGFFSWRKHRHNQQIFFEANDWHRDDHSLGNIKRFQFRELQNATHNFSSKNLVGKGGFGNVYRGYLQDGTIVAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLRLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAILDWVKKIHQEKKLEMIVDKDLRSNYDRIELEEIVRVALLCIQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAEASRSRANDFSSSERYSDLTDDSSLFAQAIELSGPR* 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3647389 3650304 + Chy9G161310.1 Chy09g00415 233312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00415 623 Gene3D Transferase(Phosphotransferase) domain 1 380 592 - -
Chy09g00415 623 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Chy09g00415 623 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Chy09g00415 623 MobiDBLite consensus disorder prediction 585 605 - -
Chy09g00415 623 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Chy09g00415 623 ProSiteProfiles Protein kinase domain profile. 303 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00415 623 SMART serkin_6 303 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00415 623 MobiDBLite consensus disorder prediction 590 605 - -
Chy09g00415 623 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 10 623 - -
Chy09g00415 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Chy09g00415 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 623 - -
Chy09g00415 623 SUPERFAMILY Protein kinase-like (PK-like) 286 582 IPR011009 -
Chy09g00415 623 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Chy09g00415 623 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Chy09g00415 623 Pfam Protein kinase domain 304 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00415 623 SUPERFAMILY L domain-like 34 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00168 Chy-Chr9:1428418 Chy09g00415 Chy-Chr9:3647389 0 dispersed
Chy11g01856 Chy-Chr11:24810230 Chy09g00415 Chy-Chr9:3647389 3.67E-79 dispersed
Chy09g00415 Chy-Chr9:3647389 Chy10g01091 Chy-Chr10:15982725 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71462 PF00069 Pkinase 3.80E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00415 - - csv:101222667 1186.4