Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00462 ATGGCGGGAGTAGAATTGCTGGACATGTTTCCTCATCGGGACCTGGAAGAGGGAGCCACTGCCTCTTCTGATTGGAATCCAACTGATGCTGTGCTGTTTTTTGGACTGAGTTTGGTACTTGGAATTGCTTGCAGACACCTATTGCGAGGCACTCGAGTTCCTTATACAGTTGCCTTGCTTGTTCTTGGCATAGTCCTTGGATCTATTGAATATGGCACACATCATCAATTAGGAAAGATAGGGGACGGCATACGTCTTTGGGCAAAAATTGATCCTGATTTATTACTGGCTGTTTTCCTCCCTGCTTTGCTGTTCGAGAGTTCCTTTTCAATGGAAGTGCACCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTGGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTAGGATCTGCTTTCAAGCTTACTTTCCCATATAATTGGAGTTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTTGTGGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAATACAATAATAGAAGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTAACTGGGGAGCTATAATCAAATATCTCACACAAGTCTCGCTGGGAGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATTTTCAACGACACAGTGATAGAGATTGCATTAACACTAGCTGTGAGCTATATTGCTTACTTCACTGCTCAAGAGGGAGCTGATGTTTCGGGTGTTTTGACAGTGATGACTTTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGTGACGGCCAACAAAGCTTGCATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACGTTAATTTTCATATTGAGTGGAGTTGTTATCGCTGAAGGTGTTCTTGGAAGCGAAGGAATTCTTGATAATGGAGCTTCATGGGGCTACCTCATTCTACTTTATGTGTACGTGCAAGCTTCTCGAATTATGGTTGTTGGAGTATTGTATCCATTTCTGCGGTATTTTGGATATGGCTTGGATTGGAAAGAAGCTACAATACTAATATGGTCAGGTCTGCGTGGAGCTGTTGCTCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCAATCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTCACGGGTGGAATTGTATTCTTGACGCTGATTGTAAATGGTTCGACCACACAATTCATCTTACATCTTCTCAACATGGACAAGCTTTCCGTGGCTAAGAAACGCATATTGGATTATACAAAATACGAGATGATGAACAAAGCATTGGGCGCCTTTGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGGCTACCGTTAAAAGACATATTACAAGTCTCAGTCACGTGGAGGGGGAGCCACTGCACCCGCACAACGCATTTGAAAGTGATCAAAATGTTCGATCTATGAATTTGAGAGACATTCGTTTGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGTATGCTTGATGAGGGAAGGATAACACAAAGTACTGCCAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCAGATTTCATATGAGCCCCTATGTGATTGGAAAGGTTTAAAGTCTAATGTCCATTTTCCAAACTATTACAAGTTCCTTCAAACAAGCGTTTTCCCTCAGAAGTTGGTTACATATTTCACTGTGGAAAGATTACAGTCCGGTTGTTATATTTGTGCTGCATTTCTCCGTGCACATCGAATTGCAAGACAGCAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTAATTAATGAAAGTGAAGCTGAGGGTGAAGAAGCACGAAAGTTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAAGTAACATATTCAGTGCTCAACCATTTAATTGAATATGTCCAAAATCTGGAGAAGGTTGGCTTGTTAGAAGAGAAAGAGATGTTGCATCTTCATGATGCTGTTCAGACCGACTTGAAAAGGCTTCTACGAAATCCTCCTTTGATAAAGATTCCAAAAATGCGGAACTTAATCAGTGCCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTGCGTGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTAACACTTTACAAGGAAGGTTCAAAGCCTAATGGTGTTTGGCTTATATCCAACGGAGTGGTAAAGTGGATAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCCACATTTACTCATGGAAGCACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCCTCTGTGACATGATTACAGATTCCGTTGTTCTCTCTTTTTTTATTGAACATGACAAGTTTCTTTCAATACTTAGATCAGATCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTCTTGCTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATCTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGCATATAGCAGGAGAAACAATAGAAATTCCACCCCATTCTATTGGCCTTTTGTTGGAAGGATTTATCAAAAGTCATGGCATCCAAGAGGAACTTATTTCATCACCTGCTGTATTGTTCTCGTACAGGAATCCGAGCTTCCACAATATGGAAAACTCAGGGATGAGTGGTTCTAGTTTTTCTCATCATGGCTCCCATCATGAAGTTGAAACAAGATCAAGAGTGATCGTTTTTGACATGGGTGCCCTTCAATCGGATGAAAATCTAAATCGGTCGTCGTCTTTTATTCATTCCATTGATCACCCTCAAAGATCTCTAAGCAGAGATCACTCAGGTCTTATGAGTTGGCCTGAAATGCTTTCTAAGCCTAGACCACCACAGAAGCAGAAATCTGAAAGAATTGAGCGTCCAGCTGATAGCTTGTCTGCAAAGGCCATGCAACTAAGCATATACGGTAGCATGGTTGATTTTCGTCAGCGGACTAAGAGTTTTCCAGGCAATATTGCTGAACCATCTCATAGCCGGTCGAATCCCGCAATTGGTTCACATAAAGGTGTTTCCCTTCCATATGTAAAATCAGAAGGAGCTGCTACATTGAAGAAGAGGCTTGATGCAAGAAAGTTACCAATAAGCAATGTTAGACCCCCACAACAAAAAGCACTTCCTAATGAGAGAAATGTAAGGGATGATTCAAGTGAGGAATCGGGTGGTGAGGACGATGTGATAGTGAGAATTGATTCACCAAGTGTGCTTTCATTTCACCAGGTACCATGA 3432 41.58 MAGVELLDMFPHRDLEEGATASSDWNPTDAVLFFGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHQLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLTVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSEGILDNGASWGYLILLYVYVQASRIMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDQSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLNMDKLSVAKKRILDYTKYEMMNKALGAFGDLGDDEELGPADWATVKRHITSLSHVEGEPLHPHNAFESDQNVRSMNLRDIRLRLLNGVQAAYWGMLDEGRITQSTANILMQSVDEALDQISYEPLCDWKGLKSNVHFPNYYKFLQTSVFPQKLVTYFTVERLQSGCYICAAFLRAHRIARQQLHEFIGDSDIASTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLIKIPKMRNLISAHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPNGVWLISNGVVKWISKSMRNKFSLHPTFTHGSTLGLYELLTGKPCLCDMITDSVVLSFFIEHDKFLSILRSDPSVEDFLWQESSIVLAKLLLPQVFEKMEMRDLRVLVVERSVMTTHIAGETIEIPPHSIGLLLEGFIKSHGIQEELISSPAVLFSYRNPSFHNMENSGMSGSSFSHHGSHHEVETRSRVIVFDMGALQSDENLNRSSSFIHSIDHPQRSLSRDHSGLMSWPEMLSKPRPPQKQKSERIERPADSLSAKAMQLSIYGSMVDFRQRTKSFPGNIAEPSHSRSNPAIGSHKGVSLPYVKSEGAATLKKRLDARKLPISNVRPPQQKALPNERNVRDDSSEESGGEDDVIVRIDSPSVLSFHQVP* 1144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4118669 4137954 - Chy9G161780.1 Chy09g00462 233359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00462 1143 MobiDBLite consensus disorder prediction 1109 1127 - -
Chy09g00462 1143 Pfam Cyclic nucleotide-binding domain 760 843 IPR000595 -
Chy09g00462 1143 CDD CAP_ED 737 846 IPR000595 -
Chy09g00462 1143 MobiDBLite consensus disorder prediction 986 1027 - -
Chy09g00462 1143 ProSiteProfiles cAMP/cGMP binding motif profile. 737 840 IPR000595 -
Chy09g00462 1143 MobiDBLite consensus disorder prediction 1011 1025 - -
Chy09g00462 1143 Gene3D Jelly Rolls 699 863 IPR014710 -
Chy09g00462 1143 MobiDBLite consensus disorder prediction 1049 1072 - -
Chy09g00462 1143 Gene3D - 151 203 - -
Chy09g00462 1143 MobiDBLite consensus disorder prediction 1093 1130 - -
Chy09g00462 1143 PANTHER SODIUM/HYDROGEN EXCHANGER 25 971 IPR018422 GO:0006812|GO:0015299|GO:0016021
Chy09g00462 1143 MobiDBLite consensus disorder prediction 1051 1067 - -
Chy09g00462 1143 PANTHER - 25 971 - -
Chy09g00462 1143 Pfam Sodium/hydrogen exchanger family 33 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy09g00462 1143 SUPERFAMILY cAMP-binding domain-like 723 851 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00462 Chy-Chr9:4118669 Chy12g00618 Chy-Chr12:8840560 1.11E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00462 - - csv:101209966 2158.26