Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00488 ATGAAGAGGGAGCTTGAAGATGATAGATCTACTACCCCTGGGGATGCCCCGAGGATTGTGAAAGGAGATTGTTCTTCAATGTCGTCTGGAAAACTCAAGATGTGGCAGCCCCATGAGGAGGAGGAGGGGAAGGATGCCAAAGACGGCGCCGCCGGTGGAATGGATGAGTTGCTTGCTGTTTTGGGTTACAAGGTTCGCTCCTCAGATATGGCGGATGTGGCTTTGAAGTTGGAGCAGCTTGAGATGGTCATGGGAACTGCTTACGAACATGGGATTTCTCATCTCGCTTCCGATACTGTTCATTATAATCCTTCTGATCTCTCTTCTTGGGTTCAAAACATGCTCTCTGAATTCAATAATTCCACTAACCATTTTAATCCTCCCCCTCAATCTTCTCCCTATTCCAATTCTCACCACCCCATTCAATCTACCAAATCTTGTTTCTACGACGATGATTCTGAGTACGATCTTAGTGCCATTCCTGGCGTTGCAGTTTTACCTCCTAAAGATGAAACCCAAACTAATTCTCGCAAGCGATTGAAGATTGAAACACAGAGTAGTTCGGTTAATTTGCTACCGTCGCCGTCCTCCTCTTCGCCGCCGTTCGCTTCTACGCCGGGGATTGCCTCTGAATCTTCGCGGCCGGTGATAGTTGTGGAAGAGGATTCACAAGAGACTGGGATTCAACTTGTTCACGCTCTAATGGCTTGCGCTGAAGCTGTACAGCAAGAGAATATGAAGCTCGCCGATGCGTTGGTGAAGCACATCGGATTTCTTGCAACGTCTCAAGCCGGCGCTATGAGGAAAGTCGCCACGTATTTCGCTCAAGCCCTAGCTCGTCGGATTTACAGAATCTATTCTCCTCAAGATGGACTATACTCCTCCTACTCCGATCCTCTTCAGATGCACTTTTACGAAACCTGTCCGTATCTGAAATTCGCGCATTTCACTGCCAATCAAGCCATTCTTGAAGCGTTCGCGACGGCGGCGAGAGTTCATGTCATCGATTTCAGTCTTAATCAAGGTATGCAGTGGCCGGCGCTTATGCAGGCACTCGCGTTGCGGCCTGGAGGTCCACCGGCGTTTCGATTGACTGGAATCGGCCCGCCGCAGCCGGAAAATGCAGCGGGTTCGTTGCAGCAAGTCGGTTGGAAGTTAGCGCAGATGGCAGAGGCCATTGGTGTTGATTTCGAGTTCAATCACATCGTGTGTAGTAATCTAGCGGATCTGGATCCGGCGGCTCTTGAGATTCGACCGGCGGCGGTGGAGGCGGTGGCGGTAAACTCGGTGTTCGATCTGCACCGGTTGTTGGCTCGGCCTGGAGCGATTGAGAAGGTTTTGGGAACGATAAAGACGACGAAGCCGAAGATAGTAACGATTGTGGAACAAGAAGCGAACCACAACGGGCCGGTTTTCCTGGACCGGTTTACTGAGGCGTTGCATTATTACTCGAATCTGTTCGACTCGTTGGAAGGGTCTTCGAGCGGGTTCGAACCGGGAAGTGAGGACGTGTTGTTGTCGGAGGTTTATTTAGGAAAGCAGATATGCAACGTGGTGGCTTGTGAAGGAACGAACCGAGTGGAGAGGCATGAATCACTGACTCAGTGGCGAGCTAGGATGGAATCGGCCGGGTTTGATCCGGTCCATCTCGGTTCAAACGCGTTTAAACAAGCTAGTATGCTTTTGGCCCTCTTTGCAGGAGGAGAAGGGTACAGGGTGGAAGAGAATAATGGGTGTTTAATGCTTGGCTGGCACACTAGACCGTTGATCGCCACGTCCGCATGGCAACTCGCTCCTGATGAGTCGAAGTGA 1812 50.77 MKRELEDDRSTTPGDAPRIVKGDCSSMSSGKLKMWQPHEEEEGKDAKDGAAGGMDELLAVLGYKVRSSDMADVALKLEQLEMVMGTAYEHGISHLASDTVHYNPSDLSSWVQNMLSEFNNSTNHFNPPPQSSPYSNSHHPIQSTKSCFYDDDSEYDLSAIPGVAVLPPKDETQTNSRKRLKIETQSSSVNLLPSPSSSSPPFASTPGIASESSRPVIVVEEDSQETGIQLVHALMACAEAVQQENMKLADALVKHIGFLATSQAGAMRKVATYFAQALARRIYRIYSPQDGLYSSYSDPLQMHFYETCPYLKFAHFTANQAILEAFATAARVHVIDFSLNQGMQWPALMQALALRPGGPPAFRLTGIGPPQPENAAGSLQQVGWKLAQMAEAIGVDFEFNHIVCSNLADLDPAALEIRPAAVEAVAVNSVFDLHRLLARPGAIEKVLGTIKTTKPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGSSSGFEPGSEDVLLSEVYLGKQICNVVACEGTNRVERHESLTQWRARMESAGFDPVHLGSNAFKQASMLLALFAGGEGYRVEENNGCLMLGWHTRPLIATSAWQLAPDESK* 604
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 4725309 4727120 + Chy9G162040.1 Chy09g00488 233385
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00488 603 Gene3D - 53 118 IPR038088 -
Chy09g00488 603 Pfam Transcriptional regulator DELLA protein N terminal 55 122 IPR021914 -
Chy09g00488 603 MobiDBLite consensus disorder prediction 179 209 - -
Chy09g00488 603 MobiDBLite consensus disorder prediction 163 209 - -
Chy09g00488 603 MobiDBLite consensus disorder prediction 34 50 - -
Chy09g00488 603 ProSiteProfiles GRAS family profile. 221 596 IPR005202 -
Chy09g00488 603 MobiDBLite consensus disorder prediction 121 145 - -
Chy09g00488 603 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 596 IPR005202 -
Chy09g00488 603 Pfam GRAS domain family 230 596 IPR005202 -
Chy09g00488 603 PANTHER DELLA PROTEIN RGL1 48 596 IPR030006 GO:0003712|GO:0005634
Chy09g00488 603 SMART DELLA_2 55 128 - -
Chy09g00488 603 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01757 Chy-Chr1:23270371 Chy09g00488 Chy-Chr9:4725309 1.60E-50 dispersed
Chy03g00094 Chy-Chr3:912130 Chy09g00488 Chy-Chr9:4725309 3.81E-103 dispersed
Chy06g01359 Chy-Chr6:13467063 Chy09g00488 Chy-Chr9:4725309 0 dispersed
Chy08g00536 Chy-Chr8:12746775 Chy09g00488 Chy-Chr9:4725309 3.79E-69 dispersed
Chy09g00488 Chy-Chr9:4725309 Chy09g00844 Chy-Chr9:11256207 0 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18474 PF03514 GRAS 1.70E-134 CL0063 Chy TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00488 K14494 - csv:101213911 1127.08