Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00551 ATGGACTCAAGGGGCCATTCTAATGGCGGAGAACTTGAAACAAATGAGATGGACATTAGAAATCTTTCGTCTTCACGCAACAATACTCACTGCGTCCATAAGGTGGGGGTTCCACCAAAGCAAAATCTCTTCACAGAATTTAAAACCAGAGTGAAAGAGACATTCTTTGCAGATGATCCTCTGCGAACCTTCAAGGACCAATCAAAGTCCCGAAAGCTAGTCCTGGGAATTCAGACTATCTTCCCTATATTTGAATGGGGGAGGAATTACAATCTAACTAAATTTAGAGGAGATATAGTTGCTGGACTCACTATTGCAAGTTTGTGTATTCCACAGGATATAGGGTATGCAAAACTTGCTAATTTGGCTCCCCAGTATGGATTATATTCCAGCTTTGTACCACCACTAGTTTATGCTTTGATGGGTAGCTCAAGAGACATAGCGATTGGACCAGTGGCCGTTGTTTCTCTCTTGCTGGGAACACTGCTTCAAAAGGAGATTGATTACCACACACATCCAGAAGAGTATCTGCGGCTTGCATTTACAGCTACCTTTTTTGCTGGGATCACCCAAGCCACTCTAGGGATACTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCATGCTGCCATTGTGGGTTTTATGGGCGGTGCTGCTATCACTATTGCCCTTCAGCAACTTAAAGGCTTTCTTGGTATTCAAAAATTTACAAAGAAAACAGACATTATCTCTGTAATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACAATAGTCATTGGAGTAGCTTTTCTAAGTTTTCTACTGTTTGCCAAGTATATTGGAAAGAAGAATAAGAACCTCTTTTGGGTGCCTGCAATTGCTCCATTAATATCAGTTATTCTGTCCACCTTCTTTGTTTACATAACCCATGCAGACCAGAAAGGTGTTGCAATCGTGAAACATATAGAGAGAGGAATCAACCCCTCATCCGTGAAGCAAATCTACTTCACGGGTGACAACCTCCTTAAAGGATTCAGGACTGGCGCGGTGGCTGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTACCATGAAGGACTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTAGGAACAATGAATGTTATTGGTTCAATGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGTCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTTTAGAATTCATCACTCCCCTATTCAAATACACTCCAAATGCTATTCTCGCTGTCATCATTATCTCTGCTGTGATCAACTTGATTGACATTCAAGCAGCAATTTTGCTCTGGAAGATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTCGGTGTGATATTTGCAAGTGTTGAGAAAGGCCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGGGTCTCTGTTCTCGGAAAAATCCCTAGGACTACGGTATATAGGAACACTCAACAGTATCCAGAAGCAACAAGGGTTCCGGGCATTCTCATTGTGAGAGTTGATTCTGCGATTTACTTCTCTAACTCCAACTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAACAAACAAAGAAGGCCTATTCACCAAAAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTACTGACATTGATACTAGTGGAATTCATGCCTTGGAAGAGCTATACAAGAATCTCCAGAAAAGAGACATTCAGCTTGTTTTGGCAAACCCGGGGCCAGTAGTGATTGACAAACTCCACGCATCCGATGTTACTAATCTGATTGGGGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTATCATCCTGCTCCCCAAAATTGGTGGAAGAGGCCTAG 1977 42.19 MDSRGHSNGGELETNEMDIRNLSSSRNNTHCVHKVGVPPKQNLFTEFKTRVKETFFADDPLRTFKDQSKSRKLVLGIQTIFPIFEWGRNYNLTKFRGDIVAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTLLQKEIDYHTHPEEYLRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIQKFTKKTDIISVMRSVFEAAHHGWNWQTIVIGVAFLSFLLFAKYIGKKNKNLFWVPAIAPLISVILSTFFVYITHADQKGVAIVKHIERGINPSSVKQIYFTGDNLLKGFRTGAVAGMIALTEAIAIGRTFATMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAVIIISAVINLIDIQAAILLWKIDKFDFVACLGAFFGVIFASVEKGLLIAVSISFAKILLQVTRPRVSVLGKIPRTTVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKERILRWLADEEEQTKKAYSPKTQFLIVEMSPVTDIDTSGIHALEELYKNLQKRDIQLVLANPGPVVIDKLHASDVTNLIGEDHIFLTVAEAVSSCSPKLVEEA* 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5849473 5853745 + Chy9G162670.1 Chy09g00551 233448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00551 658 Pfam STAS domain 528 646 IPR002645 -
Chy09g00551 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Chy09g00551 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy09g00551 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Chy09g00551 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Chy09g00551 658 PANTHER SULFATE TRANSPORTER 18 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy09g00551 658 PANTHER SULFATE TRANSPORTER 1.3 18 657 - -
Chy09g00551 658 Gene3D STAS domain 507 653 IPR036513 -
Chy09g00551 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Chy09g00551 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00268 Chy-Chr1:1871607 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy01g00269 Chy-Chr1:1876066 Chy09g00551 Chy-Chr9:5849473 1.23E-41 dispersed
Chy01g02056 Chy-Chr1:25423469 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy07g00704 Chy-Chr7:6877474 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy07g01316 Chy-Chr7:17804054 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy09g00551 Chy-Chr9:5849473 Chy09g00752 Chy-Chr9:9955777 3.55E-135 dispersed
Chy09g00548 Chy-Chr9:5755717 Chy09g00551 Chy-Chr9:5849473 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00551 K17470 - csv:101212138 1252.27