Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00569 ATGGATCCCAGGAAAATCCCAGGGAAACCTAAGCTTGGCCGACTTAATGCGGCCAAGAATATTGATTATGATGCTCCTTCCTCGTCTTCTTCGCTCGAAGATTCTTCTGGGTCTCTTTACACTCGTTCCATGGAAAACCCCGATCCCTCCAGTTTTCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACCCTAGGGCTAGCTGGCCCTGACGACTTTGCTATTCCGATGGAGGCTTGGGAGGCTAGAAAGGTTCGTTCATCTTCCGAGCTTCTACCGAGGTCGAGGCTTTATCCTATGGATACCTCTCCGAAGACAGAGGAGATTAGTAAGGATAAGGAAGATAAAGAAATTCAAGATGAATTATGTCGGAGGGTTAAGGATTCAGTTCGAATTAGCGTCGAGCTTTCCAAGACTAAGACCGAATTTGCAGAGTTGAATGAACGCCGGATGGCTACTGCTACTGGATGTAGTTCGAGGAGTGGAATCAATGGTGCCCGGCCTCCTTTACTTAAGCCGCCGCCGTCCATGCGGCTACCAAATTTCGATAATGCTTGCTCTACTTGGGACATTTTGAAAGGTTTTGCTCCATTAGTTGAGGATGAACATCAAGAGGAAGTAGGAGAACGTGTGGAACCTTTAGTTGAAGTAGAAGGAGAAGGAGAAGGAGAAGGAAATACAGTGAGGCCTGTGGAGAACGCATCGCTCATAGGGTCTTGGGGATCCTTCACGACATCGAATGATGATGATTCTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAGGGGTAATCCCATTATCACATCCTGGGTTTTAGGCAGGCTTCTTGGGCGCGGTTCATTTGGATCAGTATACGAAGCAATTTCAGAGGATGGGACATTTTTTGCACTCAAAGAAGTTTCACTGCTCGATGAAGATAGTCAGGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCTCTTCTAAGTGAGTTTGAGCATGAGAACATAGTTCAGTACTATGGCACACATTCGGATGGGTCAAAACTATATATCTTCCTCGAGCTTGTATCTCAAGGCTCCCTTATGAGTTTATATCAGAGGACAAGCCTTATGGATTCCATTGTTTCTGCCTACACAAGGCAGATTCTATCGGGTTTAAAGTATCTTCACGAGCGAAATGTGATTCACAGGGATATTAAATGTGCTAATATATTGGTGGACGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCAAAGGCAACAAAATTGAACGATGTTAAATCTTGTAAGGGAACTGCGTATTGGATGGCACCTGAGGTGGTTAATGGGAAGGGTCAAGGATATGGTCTACCTGCCGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACCCGAAAGCTTCCATATTCAGAATTCGAATCTCATATGCAGGCACTATTTAGAATCGGTAAAGGCAAACCGCCTGCAGTTCCCGAGTTTCTCCCAAAAGATGCACAGGATTTCATTTTGCAGTGCCTACAAGTTAATCCAAAGGACCGTCCTACTGCTGCTGATCTTTTAAATCACTCGTTTGTGAAAAGACCAGTCTCCAGTTTATCAGGGTCGGCATCTCCTTATAACAGGCCAGGCAGGAGGATTTAA 1659 45.09 MDPRKIPGKPKLGRLNAAKNIDYDAPSSSSSLEDSSGSLYTRSMENPDPSSFRIKGLDGEVDLICRTLGLAGPDDFAIPMEAWEARKVRSSSELLPRSRLYPMDTSPKTEEISKDKEDKEIQDELCRRVKDSVRISVELSKTKTEFAELNERRMATATGCSSRSGINGARPPLLKPPPSMRLPNFDNACSTWDILKGFAPLVEDEHQEEVGERVEPLVEVEGEGEGEGNTVRPVENASLIGSWGSFTTSNDDDSSSSTTEPANISPNMRGNPIITSWVLGRLLGRGSFGSVYEAISEDGTFFALKEVSLLDEDSQGRQSIYQLQQEIALLSEFEHENIVQYYGTHSDGSKLYIFLELVSQGSLMSLYQRTSLMDSIVSAYTRQILSGLKYLHERNVIHRDIKCANILVDVNGSVKLADFGLAKATKLNDVKSCKGTAYWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSEFESHMQALFRIGKGKPPAVPEFLPKDAQDFILQCLQVNPKDRPTAADLLNHSFVKRPVSSLSGSASPYNRPGRRI* 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6250326 6255148 + Chy9G162850.1 Chy09g00569 233466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00569 552 MobiDBLite consensus disorder prediction 1 52 - -
Chy09g00569 552 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 103 541 - -
Chy09g00569 552 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 9 113 - -
Chy09g00569 552 MobiDBLite consensus disorder prediction 242 267 - -
Chy09g00569 552 PRINTS Tyrosine kinase catalytic domain signature 355 368 IPR001245 GO:0004672|GO:0006468
Chy09g00569 552 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Chy09g00569 552 PRINTS Tyrosine kinase catalytic domain signature 456 478 IPR001245 GO:0004672|GO:0006468
Chy09g00569 552 PRINTS Tyrosine kinase catalytic domain signature 390 408 IPR001245 GO:0004672|GO:0006468
Chy09g00569 552 SMART serkin_6 277 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00569 552 Gene3D Transferase(Phosphotransferase) domain 1 269 545 - -
Chy09g00569 552 ProSiteProfiles Protein kinase domain profile. 277 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00569 552 Pfam Protein kinase domain 280 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00569 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Chy09g00569 552 MobiDBLite consensus disorder prediction 157 179 - -
Chy09g00569 552 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 103 541 - -
Chy09g00569 552 MobiDBLite consensus disorder prediction 22 48 - -
Chy09g00569 552 SUPERFAMILY Protein kinase-like (PK-like) 275 534 IPR011009 -
Chy09g00569 552 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 9 113 - -
Chy09g00569 552 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00957 Chy-Chr6:7050402 Chy09g00569 Chy-Chr9:6250326 4.44E-81 dispersed
Chy09g00569 Chy-Chr9:6250326 Chy07g00059 Chy-Chr7:518162 1.12E-45 dispersed
Chy09g00585 Chy-Chr9:6761056 Chy09g00569 Chy-Chr9:6250326 4.30E-23 dispersed
Chy09g00569 Chy-Chr9:6250326 Chy09g01038 Chy-Chr9:12879506 4.83E-82 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71465 PF00069 Pkinase 6.50E-69 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00569 K13414 - csv:101218538 1019.99