Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g00586 | ATGGCATCCGCCATGGCCAAACCCAAAACTCAGAGAAAGCTCAGCAGACATACCCATGAAAACCAGAAACCAAATCCACAGAAGGCAGAGAAGCCGCCGTCTTGGGCAGTTGTGAGAGGCATATTAAGTTGCAAGTACCTGCAGCCTCAGCAACAACATCAATTACCACGCAAAGAGAAACAGGAGCAAGCAACAGAAGAAAATGTCAAGAACTGTAAGAAAATGAGGTGTTCAGGTTCACTCTGTAGCAACACCAAGGTAGCACACAGGCTTGAAGCAGCTGCATCCCCTGAAGTTCACAAGAAAAGGGCATTAACTTCAATGGGTTCAAGAAACAATGAATCTTCAAGTTCGAATAGATCCACCAAAGCTCTTCTTTTGAATGAACAAACAACTGGTGTTCTATCAGCCACATCTTCATCTTTATCTGCATCATCTTCTTCTTCAAATTCCTCCAATGGGGCATCTTTCAGGGGAATGCCTTTCAGAAGGTTTTACGGCTGTTATGAATGTAAAATGGTGATTGACCCTGTTATTGGGATGACTAGAGATCCTTCTCTTAGAGCAACTATTTGCCCTTGTCCTCAATGTGGTGAGATTTTCATGAAACCTGAAACTTTGGAGCTTCACCAGACTGTTAGACATGCCGTATCTGAGCTTGGTCCTGAAGACACAAGCAAGAACATAGTGGAAATCATATTCCAGTCGAGTTGGCTGAAAAAGCAAACCCCAATTTGCAAAATCGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTCGAAATTCGAGGAATACAGGGACTCCATAAAAGCCAAAGCCACCAAACTTCCAAAGAAGTACCCACGTTGTATAGCAGACGGTAACGAACTCCTAAGGTTCCACTGCACCACCTTGAACTGTTCATTGGGTTTGAATGGCTCTTCCAACCTCTGCAGTTCAATCCCACAATGCAATGTTTGTAGCATAATAAAAAATGGGTTCAAGGTGGCGGCAGAGGCAACCGGTGGGGACGCTGGAAAGGGAATTCTAACTACTGCTACGAGTGGAAAGGCTCATGACAGTGTCGGAGTATCATCAGACGGCGGCAACAACAAAAGAGCTATGCTGGTTTGCCGGGTAATAGCTGGGAGGGTGAAGAAGAGTTCAGAAGGCAGCATGGAAGATTACGACTCATTGGCCGGAGCAGCAGGCATGTATTCCAATTTGGATGAGTTGTATGTGTTCAGTCCCAAGGCAATATTGCCTTGTTTTGTTGTCATTTATGGAGGTTTTTGA | 1281 | 44.57 | MASAMAKPKTQRKLSRHTHENQKPNPQKAEKPPSWAVVRGILSCKYLQPQQQHQLPRKEKQEQATEENVKNCKKMRCSGSLCSNTKVAHRLEAAASPEVHKKRALTSMGSRNNESSSSNRSTKALLLNEQTTGVLSATSSSLSASSSSSNSSNGASFRGMPFRRFYGCYECKMVIDPVIGMTRDPSLRATICPCPQCGEIFMKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTISKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGLNGSSNLCSSIPQCNVCSIIKNGFKVAAEATGGDAGKGILTTATSGKAHDSVGVSSDGGNNKRAMLVCRVIAGRVKKSSEGSMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVVIYGGF* | 427 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6787367 | 6788740 | + | Chy9G163020.1 | Chy09g00586 | 233483 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g00586 | 426 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Chy09g00586 | 426 | MobiDBLite | consensus disorder prediction | 93 | 107 | - | - | |
Chy09g00586 | 426 | MobiDBLite | consensus disorder prediction | 93 | 122 | - | - | |
Chy09g00586 | 426 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 192 | 215 | IPR013087 | - | |
Chy09g00586 | 426 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 192 | 220 | IPR013087 | - | |
Chy09g00586 | 426 | MobiDBLite | consensus disorder prediction | 48 | 70 | - | - | |
Chy09g00586 | 426 | MobiDBLite | consensus disorder prediction | 108 | 122 | - | - | |
Chy09g00586 | 426 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 34 | 423 | - | - | |
Chy09g00586 | 426 | MobiDBLite | consensus disorder prediction | 55 | 70 | - | - | |
Chy09g00586 | 426 | SUPERFAMILY | ADP-ribosylation | 217 | 424 | - | - | |
Chy09g00586 | 426 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 34 | 423 | - | - | |
Chy09g00586 | 426 | Gene3D | - | 216 | 424 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g00422 | Chy-Chr4:3738463 | Chy09g00586 | Chy-Chr9:6787367 | 2.38E-108 | dispersed | |
Chy06g01739 | Chy-Chr6:20242805 | Chy09g00586 | Chy-Chr9:6787367 | 2.21E-76 | dispersed | |
Chy09g00586 | Chy-Chr9:6787367 | Chy11g01342 | Chy-Chr11:19675931 | 7.69E-65 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18477 | None | None | None | None | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g00586 | - | - | csv:101220433 | 806.208 |