Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00586 ATGGCATCCGCCATGGCCAAACCCAAAACTCAGAGAAAGCTCAGCAGACATACCCATGAAAACCAGAAACCAAATCCACAGAAGGCAGAGAAGCCGCCGTCTTGGGCAGTTGTGAGAGGCATATTAAGTTGCAAGTACCTGCAGCCTCAGCAACAACATCAATTACCACGCAAAGAGAAACAGGAGCAAGCAACAGAAGAAAATGTCAAGAACTGTAAGAAAATGAGGTGTTCAGGTTCACTCTGTAGCAACACCAAGGTAGCACACAGGCTTGAAGCAGCTGCATCCCCTGAAGTTCACAAGAAAAGGGCATTAACTTCAATGGGTTCAAGAAACAATGAATCTTCAAGTTCGAATAGATCCACCAAAGCTCTTCTTTTGAATGAACAAACAACTGGTGTTCTATCAGCCACATCTTCATCTTTATCTGCATCATCTTCTTCTTCAAATTCCTCCAATGGGGCATCTTTCAGGGGAATGCCTTTCAGAAGGTTTTACGGCTGTTATGAATGTAAAATGGTGATTGACCCTGTTATTGGGATGACTAGAGATCCTTCTCTTAGAGCAACTATTTGCCCTTGTCCTCAATGTGGTGAGATTTTCATGAAACCTGAAACTTTGGAGCTTCACCAGACTGTTAGACATGCCGTATCTGAGCTTGGTCCTGAAGACACAAGCAAGAACATAGTGGAAATCATATTCCAGTCGAGTTGGCTGAAAAAGCAAACCCCAATTTGCAAAATCGAAAGGATTCTCAAAGTCCAGAACACTCCAAAAACCATCTCGAAATTCGAGGAATACAGGGACTCCATAAAAGCCAAAGCCACCAAACTTCCAAAGAAGTACCCACGTTGTATAGCAGACGGTAACGAACTCCTAAGGTTCCACTGCACCACCTTGAACTGTTCATTGGGTTTGAATGGCTCTTCCAACCTCTGCAGTTCAATCCCACAATGCAATGTTTGTAGCATAATAAAAAATGGGTTCAAGGTGGCGGCAGAGGCAACCGGTGGGGACGCTGGAAAGGGAATTCTAACTACTGCTACGAGTGGAAAGGCTCATGACAGTGTCGGAGTATCATCAGACGGCGGCAACAACAAAAGAGCTATGCTGGTTTGCCGGGTAATAGCTGGGAGGGTGAAGAAGAGTTCAGAAGGCAGCATGGAAGATTACGACTCATTGGCCGGAGCAGCAGGCATGTATTCCAATTTGGATGAGTTGTATGTGTTCAGTCCCAAGGCAATATTGCCTTGTTTTGTTGTCATTTATGGAGGTTTTTGA 1281 44.57 MASAMAKPKTQRKLSRHTHENQKPNPQKAEKPPSWAVVRGILSCKYLQPQQQHQLPRKEKQEQATEENVKNCKKMRCSGSLCSNTKVAHRLEAAASPEVHKKRALTSMGSRNNESSSSNRSTKALLLNEQTTGVLSATSSSLSASSSSSNSSNGASFRGMPFRRFYGCYECKMVIDPVIGMTRDPSLRATICPCPQCGEIFMKPETLELHQTVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTISKFEEYRDSIKAKATKLPKKYPRCIADGNELLRFHCTTLNCSLGLNGSSNLCSSIPQCNVCSIIKNGFKVAAEATGGDAGKGILTTATSGKAHDSVGVSSDGGNNKRAMLVCRVIAGRVKKSSEGSMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVVIYGGF* 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6787367 6788740 + Chy9G163020.1 Chy09g00586 233483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00586 426 MobiDBLite consensus disorder prediction 1 35 - -
Chy09g00586 426 MobiDBLite consensus disorder prediction 93 107 - -
Chy09g00586 426 MobiDBLite consensus disorder prediction 93 122 - -
Chy09g00586 426 ProSitePatterns Zinc finger C2H2 type domain signature. 192 215 IPR013087 -
Chy09g00586 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 220 IPR013087 -
Chy09g00586 426 MobiDBLite consensus disorder prediction 48 70 - -
Chy09g00586 426 MobiDBLite consensus disorder prediction 108 122 - -
Chy09g00586 426 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 423 - -
Chy09g00586 426 MobiDBLite consensus disorder prediction 55 70 - -
Chy09g00586 426 SUPERFAMILY ADP-ribosylation 217 424 - -
Chy09g00586 426 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 423 - -
Chy09g00586 426 Gene3D - 216 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00422 Chy-Chr4:3738463 Chy09g00586 Chy-Chr9:6787367 2.38E-108 dispersed
Chy06g01739 Chy-Chr6:20242805 Chy09g00586 Chy-Chr9:6787367 2.21E-76 dispersed
Chy09g00586 Chy-Chr9:6787367 Chy11g01342 Chy-Chr11:19675931 7.69E-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18477 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00586 - - csv:101220433 806.208