Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g00618 | ATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACCCCATTACTCTTCCACTCATCGCCGTCGGCTACGGCGGAAGCAGAGTCCCGTAAACTTCCATCTTCCCGTTTCAAAGGAGTTGTCCCTCAGCCCAACGGCCGATGGGGTGCTCAGATTTACGAGAAACATCAAAGAGTGTGGCTCGGCACTTTCAATGAAGAAAACGATGCCGCCAAGGCTTACGACATCGCCGCCCTCCGCTTCCGTGGACGCGATGCCGTCACCAACTTCAAACCCTCCCTCAACCACGACCACGACCACGCCCTCGAGGCCGACTTCCTCAACTCCCATTCCAAGTTGGAGATTGTGGACATGCTCCGTAAACACACCTACAATGAGGAGCTCCAACAGAGCAAGCGGCACCAGCGGGGGGCGATGGCAGTTGATTCGGGGTCGTTCCCCCATTACCCGGGGTCGGATTCAAACCGGGAAGTACTGTTTGAGAAAACGGTGACGCCAAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCTATGGAAGAGGGAGTGGTTTCGGGGAAGGGAATGCTTTTGAATTTTGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAAGGATGGAGCCGATTCGTCAAAGACAACACTCTCAGAGCCGGAGATGTGGTTCGCTTTCTCCGCTCTACTGGACCAGATAAGCAGCTTTACATTCATGCTAACCCCATCAATGCACCGGGAATTAACCCAGTTCATGTTGTTAAGCTTTTTGGAGTCAATATTTTGCAACTGCCGGTGGGGAAGACAGAAGGGGCATTCTTGGAATTACAACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAA | 954 | 52.41 | MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGINPVHVVKLFGVNILQLPVGKTEGAFLELQQPTKKQRIIKPL* | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7677062 | 7678015 | + | Chy9G163340.1 | Chy09g00618 | 233515 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g00618 | 317 | ProSiteProfiles | AP2/ERF domain profile. | 44 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | Pfam | B3 DNA binding domain | 168 | 266 | IPR003340 | GO:0003677 | |
Chy09g00618 | 317 | CDD | B3_DNA | 167 | 267 | IPR003340 | GO:0003677 | |
Chy09g00618 | 317 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Chy09g00618 | 317 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 28 | 296 | IPR044800 | GO:0003700 | |
Chy09g00618 | 317 | Pfam | AP2 domain | 44 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | SUPERFAMILY | DNA-binding pseudobarrel domain | 165 | 265 | IPR015300 | - | |
Chy09g00618 | 317 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Chy09g00618 | 317 | Gene3D | - | 158 | 273 | IPR015300 | - | |
Chy09g00618 | 317 | SMART | rav1_2 | 44 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | PANTHER | AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1 | 28 | 296 | - | - | |
Chy09g00618 | 317 | Gene3D | AP2/ERF domain | 43 | 100 | IPR036955 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | SMART | B3_2 | 168 | 270 | IPR003340 | GO:0003677 | |
Chy09g00618 | 317 | CDD | AP2 | 43 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | SUPERFAMILY | DNA-binding domain | 43 | 100 | IPR016177 | GO:0003677 | |
Chy09g00618 | 317 | PRINTS | Ethylene responsive element binding protein signature | 45 | 56 | IPR001471 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | PRINTS | Ethylene responsive element binding protein signature | 81 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Chy09g00618 | 317 | ProSiteProfiles | B3 DNA-binding domain profile. | 168 | 270 | IPR003340 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy09g00618 | Chy10g01117 | CCT | |
Chy09g00618 | Chy10g01117 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy09g00618 | Chy-Chr9:7677062 | Chy10g01117 | Chy-Chr10:16208218 | 1.16E-136 | dispersed | |
Chy09g00618 | Chy-Chr9:7677062 | Chy09g01354 | Chy-Chr9:15378053 | 1.53E-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18480 | PF02362 | B3 | 5.20E-28 | CL0405 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g00618 | K09287 | - | csv:101206328 | 637.876 |