Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00682 ATGTACAGGACAGTGGCTACATCTGCGGCCACAACTACCACAACAGATAGCCTGGATTATGTTGTAAATTTGGATCAAATTCCACGTTGGAGTGATGCAGAACATAGGTCTTCATTGGAGTTCGTTAACGAAGATCCTTCCTTCTCTAATTCTTACTTTCCTGATCCTCTCACGTCTCCATCTGACGCCGAAGGTGGGACCAATGGAGTCGTTTCGAGATTTCCCGTAGATCATGAAATTAATTCTAAAATATATCTCTGGAGGGGGAATCCATGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACGAACGAGAACTTGGATGAAGCGCACAGCAGCCCTGGTTTACATGCTGCTGCAGGACCTGGTCTATTAGATGAATGTGGAACACTTGGTGGTTGCCGCACAGGAATGGCAAAAGTCACTAATGCTTATGACCTTCCAGCAAGAAAGGTCATACATACTGTTGGTCCAAAATATGCTGTCAAATACCATACTGCTGCAGAGAATGCTCTGAGCCATTGCTACCGTTCTTGCCTTGAACTTCTCATTGAAAATGGGCTTCAGAGCATTGCTATGGGTTGTATATATACAGAGGCAAAAAACTATCCCCGTGAACCTGCTGCACACGTAGCAATAAGAACTGTGCGTCGTTTTCTCGAGAAGCAGAGAGATAAAATTAAAGCGGTTGTATTTTGTACAACATCATCAGTAGATACAGAAATATACAAGAGGTTGCTTCCTCTGTACTTTCCTCGTGATAAACACGAGGAAGAAGTTGCATTATCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGTGAGACCATTATAGACGAGCGGAAAATAAGGATAAAACCTTTACCCAAAAAGAATGTTCCAAAGCCTCCCCAAGTTCTTAATGATACTCCTGTCAGTGATGTAAGGTTGACACGGAGGAACTCATCATATTTGGATTCATACTTGGATCCTGCTTTCATGGCTTTAATCAAAGACCCAGATCAAAGACGCAAGGAACAATGGGAAAAAACTGCCCAGGCGCAGACTGGATGGAACTATGGTAGAATACTTGGATTTGGTGACCTTGGTGGACCTCCTTTATCTGCTGCCGAAGAATACTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTTAATCTCTCTGAAATTGCGGAGATGAAAATCGTTTACCGTGGTGGAGTTGATAGTGAGGGTCGCCCTGTTATGGTTGTTGTGGGAGCACATTTTCTATTGCGTTGTCTTGATCTTGAGCGATTTGTACTCTACGTTGTAAAGGAGTTTGAGCCATTAATACAGAAGCCCTATACAATAGTGTACTTCCACTCAGCAGCTTCTTTGCAGCCTCGGCCAGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGTAACCTCCATGCAATATATGTTCTTCACCCAACCTTTGGATTGAAAGCTGCAGTATTGGCCATGCAATTGCTCGTGGATAATGTGGTATGGAACAAAGTTGTATACATTGATCGGCTACTGCAGCTATTCAAATACGTTCCTCGTGAGCAGTTGACCATCCCCGACTTTGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCTTGATTGTAGATCCTCGAACAAAATACGTATACCATCGGCCTTAG 1680 43.51 MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSPSDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLLDECGTLGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQRDKIKAVVFCTTSSVDTEIYKRLLPLYFPRDKHEEEVALSKLPADVGDENGETIIDERKIRIKPLPKKNVPKPPQVLNDTPVSDVRLTRRNSSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGDLGGPPLSAAEEYSLHSRYLAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNVVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP* 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8921823 8942704 + Chy9G163980.1 Chy09g00682 233579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00682 559 SUPERFAMILY CRAL/TRIO domain 388 527 IPR036865 -
Chy09g00682 559 Pfam Divergent CRAL/TRIO domain 406 537 IPR001251 -
Chy09g00682 559 Gene3D Leucine Aminopeptidase, subunit E, domain 1 14 256 IPR043472 -
Chy09g00682 559 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 539 - -
Chy09g00682 559 CDD Macro_GDAP2-like 82 250 IPR035793 -
Chy09g00682 559 Gene3D - 389 540 IPR036865 -
Chy09g00682 559 ProSiteProfiles Macro domain profile. 71 251 IPR002589 -
Chy09g00682 559 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 539 - -
Chy09g00682 559 Pfam Macro domain 100 212 IPR002589 -
Chy09g00682 559 SMART YBR022w_8 83 212 IPR002589 -
Chy09g00682 559 SUPERFAMILY Macro domain-like 73 280 IPR043472 -
Chy09g00682 559 SMART sec14_4 390 536 IPR001251 -
Chy09g00682 559 CDD SEC14 394 530 IPR001251 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02266 Chy-Chr6:26630898 Chy09g00682 Chy-Chr9:8921823 2.09E-11 dispersed
Chy09g00682 Chy-Chr9:8921823 Chy10g00320 Chy-Chr10:7962404 5.73E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00682 K24997 - csv:101209942 1112.06