Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00691 ATGTCCATCTCTTCTTCCTCCGACTGCTTCATTGACTCTCACTTACTCTGTGATGAAGACTCCTCCGGTATTTTGTCCGGAGACTTACTGGAGTACTCCTCTGACCTTGAATCGGCGGCCAGCAGTGAGGATTCTATCGCCAGTTTCATAGAGGACGAGAGGCACTTCGTTCCTGGAATTGATTATTTGTCGCGCTTTCAGTCTCAATCGCTCGATTCTTCCGCAAGAGCCGATTCTGTTGCATGGATTCTCAAGGTTCAAGCATATTACGGTTTTCAACCACTCACTGCATACCTTTCCGTCAACTACTTGGATCGATTCCTTTATTCTCGCCGCTTGCCAGAAACAAATGGATGGCCGTTGCAGCTTCTTTCAGTGGCTTGTTTATCACTTGCAGCTAAAATGGAGGAACCCATTGTTCCTTCATTCGTTGATCTGCAGATTGAAGGAGCAAAATATATATTTGAATCTAGAACAATACGTAGGATGGAGCTACTTGTGCTGACAACTTTGAATTGGCGGCTCCGATCCGTTACACCATTCAGCTTTATCGGATTCTTCGCTTACAAAGTCGATCCCACAGGAACATTTTCCAGTTTTCTCAACTCGCGCTCCACGGAAATCATTCTCTCCAATGTTCGAGACGCTACTTTTCTTGAGTACTGGCCTTCCTGCATTGCTGCCGCTGCTTTACTTTGTGCGGCAAATGAAATTCCCAATTTGACCCTCTTGAATCCTGAACATGCCCAGTCTTGGTGCAATGGACTCAGCAAAGATAAAATAGTTGGGTGTTATCGGTTGATGCAACCGTTGACATTGGAGAGTCGTCGGAGGAAGGCACCGAAAGTGATACCGCAGCTCCGAGTGAGAGTCCGAGCTGGGTTGAGATACAGTGACTCGTCATCCTCTTCGTCCTCATCAAGGCTACCTTTTAAAAGGAGGAAGTTAAATAATTGCGTGTGGATAGAAGATGACAAAGAAAATTCCAA 989 45.8 MSISSSSDCFIDSHLLCDEDSSGILSGDLLEYSSDLESAASSEDSIASFIEDERHFVPGIDYLSRFQSQSLDSSARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSRRLPETNGWPLQLLSVACLSLAAKMEEPIVPSFVDLQIEGAKYIFESRTIRRMELLVLTTLNWRLRSVTPFSFIGFFAYKVDPTGTFSSFLNSRSTEIILSNVRDATFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAQSWCNGLSKDKIVGCYRLMQPLTLESRRRKAPKVIPQLRVRVRAGLRYSDSSSSSSSSRLPFKRRKLNNCVWIEDDKENSX 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9112491 9114416 + Chy9G164070.1 Chy09g00691 233588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00691 330 CDD CYCLIN 76 168 IPR013763 -
Chy09g00691 330 Pfam Cyclin, N-terminal domain 46 175 IPR006671 -
Chy09g00691 330 SMART Cyclin_C_2 178 311 IPR004367 -
Chy09g00691 330 Pfam Cyclin, C-terminal domain 178 282 IPR004367 -
Chy09g00691 330 SUPERFAMILY Cyclin-like 160 282 IPR036915 -
Chy09g00691 330 Gene3D - 48 239 - -
Chy09g00691 330 SUPERFAMILY Cyclin-like 40 175 IPR036915 -
Chy09g00691 330 PANTHER CYCLINS 24 318 IPR039361 -
Chy09g00691 330 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Chy09g00691 330 SMART cyclin_7 81 169 IPR013763 -
Chy09g00691 330 Gene3D - 59 176 - -
Chy09g00691 330 PANTHER CYCLIN-D1-1 24 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00160 Chy-Chr7:1346167 Chy09g00691 Chy-Chr9:9112491 1.19E-33 dispersed
Chy09g00691 Chy-Chr9:9112491 Chy10g00930 Chy-Chr10:14929061 5.36E-140 dispersed
Chy09g00691 Chy-Chr9:9112491 Chy02g00746 Chy-Chr2:4612117 9.01E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00691 K18810 - csv:101210686 592.038