Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00694 ATGTCCTCATCGCTCTGTTTCTCAATGCCGGCATTGACGCCGCACTACTGGCGGCCGAAGAACTTCAGATTTTTCCTTTTTCTTCAATCAAACCGATGTATTTGCTTCGCACCTCGCTTCGTTGCTTGCTTGAACAACGACGACTCTGTTGCAATACCCAAACCTGCTCCGCTGGCTTTCGATCCCGCGGAGGAGCTGTACGGACTTGACGTCGATTTAAAACCCAGGAATTCAGCCTCTAGTGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAATTACCATGTCCAAGTTGCCGAGGTAGGGGTTATGCGCCTTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGACTGTTCTGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCCATTGATGAAAGACCATGGGAGAAAGCACGCTCCATTTCTCCTTTAAGAATGAAGGAGGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGTTTAAAGATCAGTCGATCATTAAAAATTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCTCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAGGCTTTGAAAGCATTCTTTAGTGACCCTGAAAACCGTAGAAAGCGGAGCAGTGCAATGAAAGGAGTAAAATTTTACTGTAAAAACTGTGGCCGTGAAGGGCATCGAAGACACTATTGCCCCGAACTTAAGGAAGATTCCATCGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAAGACTTGTGAGAAGTCTGGGTTGAATGTTACACCAATGATCGCAACAATTCAGCGCCATTGTGGGATATGTGGTTTGAAGGGCCACAACAAGAGAAACTGTCAGAAGTCCGATGCACATCGTGAGAGCCATCAAAACGTGTTGAGGCCGAACTTGATAAGTGAATACAGGGCGAGCAATGACAATAGGAGAGTGAGGCAGTATCATTGTAGGATTTGCAAGGAAAGCGGGCACAGTCAACGGAATTGTCCCAGTACTGATCGGGAAGGCAATGGTCTGACTACTAGAAGATCATACAGTTGCAAACTTTGTCATGAAAAAGGGCATAATATTAGGACATGCCCAAATAGAAGCTGTTGGTGGTCCGATACGGTTGATGATCTGTTTTTTATCCATGTGGATGCTGTTTGTCACCCAAGTACAATGGAGATGGGTTATTGCGGGTTTATGGGGTCATCTTCTGGAAGTGTTTTGAGTGGTTACTATGATTTCTTTTCAAGTATTTTGGGTTCTGAAGCTGTGGATATTTATGAAGGGCTATGGAGGGGTTCCATAATGTTATAG 1500 44.67 MSSSLCFSMPALTPHYWRPKNFRFFLFLQSNRCICFAPRFVACLNNDDSVAIPKPAPLAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSISPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGLNVTPMIATIQRHCGICGLKGHNKRNCQKSDAHRESHQNVLRPNLISEYRASNDNRRVRQYHCRICKESGHSQRNCPSTDREGNGLTTRRSYSCKLCHEKGHNIRTCPNRSCWWSDTVDDLFFIHVDAVCHPSTMEMGYCGFMGSSSGSVLSGYYDFFSSILGSEAVDIYEGLWRGSIML* 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9218241 9229713 - Chy9G164100.1 Chy09g00694 233591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00694 499 ProSiteProfiles Zinc finger CCHC-type profile. 275 290 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 372 431 - -
Chy09g00694 499 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 15 355 - -
Chy09g00694 499 Gene3D - 272 322 - -
Chy09g00694 499 ProSiteProfiles Zinc finger CCHC-type profile. 382 397 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 Coils Coil 164 184 - -
Chy09g00694 499 SUPERFAMILY Retrovirus zinc finger-like domains 272 318 IPR036875 GO:0003676|GO:0008270
Chy09g00694 499 ProSiteProfiles Zinc finger CCHC-type profile. 301 317 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 SUPERFAMILY Retrovirus zinc finger-like domains 372 430 IPR036875 GO:0003676|GO:0008270
Chy09g00694 499 Pfam Zinc knuckle 409 428 IPR025829 -
Chy09g00694 499 Gene3D - 374 430 - -
Chy09g00694 499 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 15 355 - -
Chy09g00694 499 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 372 431 - -
Chy09g00694 499 SMART c2hcfinal6 274 290 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 SMART c2hcfinal6 381 397 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 SMART c2hcfinal6 332 348 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 SMART c2hcfinal6 301 317 IPR001878 GO:0003676|GO:0008270
Chy09g00694 499 SMART c2hcfinal6 412 428 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00694 - - csv:101211176 880.167