Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00695 ATGGCTTCCAACACCTTGATGAGCTGTAGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCCGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAACAATTTCGCCTTGA 741 51.01 MASNTLMSCSIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP* 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9241369 9242923 - Chy9G164110.1 Chy09g00695 233592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00695 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
Chy09g00695 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Chy09g00695 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 28 237 - -
Chy09g00695 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Chy09g00695 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 28 237 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00647 Chy-Chr8:14363437 Chy09g00695 Chy-Chr9:9241369 1.65E-48 dispersed
Chy09g00113 Chy-Chr9:941941 Chy09g00695 Chy-Chr9:9241369 2.85E-40 dispersed
Chy09g00695 Chy-Chr9:9241369 Chy12g01533 Chy-Chr12:19057148 2.01E-47 dispersed
Chy09g00695 Chy-Chr9:9241369 Chy02g02491 Chy-Chr2:28417130 3.87E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00695 K08907 - csv:101211428 503.056