Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00721 ATGGGGAAGAAGGGGGGTTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAACTGGAGACAGTGACATCTGCAGAGCCAGCTTCATTCGATGTGTCTGTTCTACCAATTGAAGAGGTGAAATTAGCAGATGCAGAGAATGAACAGAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCAGCCGTTGCAGCTGCTCAGGCTGCAGCTGAGGTCGTTCGGCTTACTACTATCCCTCGATACTCTGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATTTGGCAAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAGTCTGTTAAAAGACAAGCAACAACCACATTAAGATGTATGCAGACTCTTGCTCGTGTCCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGACAGCTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTACTTCTGCAAACAATGAATGGAATGATAGTACCAAATCAAAGGAGCAGATTGAATCCAGATTAGCTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGGTTCAATTCATTTCTTACTTTCTTGCTGAATTATTACCTCCCTGCTCAGATCATTGTTTTTCATTCTCATGGGCGTTTTCCCAACAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACTCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAAACTAAGAGCACCATCGATTATCACGATCGTGGCTCCGTCAAGAGCGTGATCAGCCACACAACCTCGATCGGAGACATCGCCAAAGCTTACGCCCGTCGCGATCTCAATCTCGACATCATCAAGCAGTTTCCAAGGACTCCGACGAGCCAAAAAACAAGCCGAGCTCCGAGTCACCAATCGCCAGGGACTCCTACGAAGGCATATTCGTCACTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATTGGGTGGGGCGGAGACGCGGATTCCAGAAGCGCATTGAGCATAAAATCGGAAAGGTACAGGCGACACAGCATTGCTGGATCATCAGTGAGAGATGATGAAAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCATCAACAGAAGCAGCGAGGGCTAGGTCCAGGTTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGGATCTCCGGGGAGTGTCGGAGCAAAGAAACGGCTGTCATTCCCAGGGTCGCCGGCGAACTCAAGGAGGCAGTCTGGTCCGCCGAAAATAGAGGCTAGTCCGATCAAGAATGTTGGAGAGAGAGAATTTACCGGCGAGAGCAGATAG 1536 48.44 MGKKGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVTSAEPASFDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIESRLANRQEAATRRERALAYAYSHQVQFISYFLAELLPPCSDHCFSFSWAFSQQNSWKNSSKSANSTFMDPNNPRWGWSWLERWMAARPWETKSTIDYHDRGSVKSVISHTTSIGDIAKAYARRDLNLDIIKQFPRTPTSQKTSRAPSHQSPGTPTKAYSSLSAGRKLKPDSPRGIGWGGDADSRSALSIKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAGSPGSVGAKKRLSFPGSPANSRRQSGPPKIEASPIKNVGEREFTGESR* 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9637359 9640712 + Chy9G164370.1 Chy09g00721 233618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00721 511 MobiDBLite consensus disorder prediction 214 228 - -
Chy09g00721 511 MobiDBLite consensus disorder prediction 420 511 - -
Chy09g00721 511 SMART iq_5 113 135 IPR000048 GO:0005515
Chy09g00721 511 MobiDBLite consensus disorder prediction 425 441 - -
Chy09g00721 511 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 267 497 - -
Chy09g00721 511 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 251 - -
Chy09g00721 511 Pfam Protein of unknown function (DUF4005) 419 489 IPR025064 -
Chy09g00721 511 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Chy09g00721 511 PANTHER IQ-DOMAIN 5-RELATED 267 497 - -
Chy09g00721 511 PANTHER IQ-DOMAIN 5-RELATED 1 251 - -
Chy09g00721 511 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Chy09g00721 511 MobiDBLite consensus disorder prediction 354 404 - -
Chy09g00721 511 Gene3D - 88 140 - -
Chy09g00721 511 MobiDBLite consensus disorder prediction 17 38 - -
Chy09g00721 511 MobiDBLite consensus disorder prediction 354 381 - -
Chy09g00721 511 Coils Coil 177 197 - -
Chy09g00721 511 MobiDBLite consensus disorder prediction 209 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02086 Chy-Chr4:26265661 Chy09g00721 Chy-Chr9:9637359 1.61E-77 dispersed
Chy07g00958 Chy-Chr7:14202843 Chy09g00721 Chy-Chr9:9637359 7.68E-26 dispersed
Chy09g00721 Chy-Chr9:9637359 Chy10g01339 Chy-Chr10:17688916 3.65E-127 dispersed
Chy11g01727 Chy-Chr11:23681797 Chy09g00721 Chy-Chr9:9637359 9.80E-34 transposed
Chy08g00816 Chy-Chr8:15732048 Chy09g00721 Chy-Chr9:9637359 6.63E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00721 - - csv:101209731 855.899