Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00756 ATGTTTCATCATCGCCACACGCGTGGCAGCTTGCCAATTCTCCCATCCACAAGTTGGTGTGTCACCCGCGCAGGCCCCTACTTTAAGCTTACTGGACCACAGCTTGTTTTACCGTTTACACTCGGATCACCGGGAGAGGCGAGCCAACCGGACGCAATAAAGGCCTCATTCGCCGAGTTCTTCTCCATGATCATCTTTGTTTTCGCCGGACAAGGATCCGGATTAGCTTTTGATAAGGTAACGGACGGTGGATCTACGACAGCGTCGGGGCTGATAATTGCATCTCTGGCTCATGCTTTTGCGTTGTTTGTGGCGGTTTCGGTGGGAGCGAATATCTCCGGCGGGCATGTGAATCCGGCAGTTACATTTGGTGCGCTTGTTGGTGGAAACATATCGTTGTTTAGAAGTATAATGTATTGGATTGCTCAATTGCTTGGCTCTGTTGTTGCTTGCTTCCTTCTTAAGTTTGCCACCGGTGGAAAGGTAACGCCAGCATTTGGTCTATCATCAGGAGTTTCTGTATGGAATGGATTTATATTTGAGGCAGTGATGACATTTGGATTAGTATATACAGTATATGCAACAGCAATAGATCCAAAGAGGGAGAATTTAGGTATCATTGCCCCAATTTCAATTGGTTTCATCGTTGGTGCTAACATTTTAGTTGGTGGTGCTTTTGATGGTGCTTCCATGAACCCTGCAGTCACCTTTGGCCCTGCTGTTCTCACTTGGTCATGGACCCATCACTGGGTTTACTGGCTTGGTCCTATGACTGGTGCAGCCATTGCTGCCATTGTTTATGATACACTCTTTATCTCTGACTCCATGCATGATCCTCTTACTCAGTATAATGATTTCTAG 861 46.69 MFHHRHTRGSLPILPSTSWCVTRAGPYFKLTGPQLVLPFTLGSPGEASQPDAIKASFAEFFSMIIFVFAGQGSGLAFDKVTDGGSTTASGLIIASLAHAFALFVAVSVGANISGGHVNPAVTFGALVGGNISLFRSIMYWIAQLLGSVVACFLLKFATGGKVTPAFGLSSGVSVWNGFIFEAVMTFGLVYTVYATAIDPKRENLGIIAPISIGFIVGANILVGGAFDGASMNPAVTFGPAVLTWSWTHHWVYWLGPMTGAAIAAIVYDTLFISDSMHDPLTQYNDF* 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10013912 10017908 + Chy9G164720.1 Chy09g00756 233653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00756 286 PANTHER AQUAPORIN-8 39 280 IPR034294 -
Chy09g00756 286 CDD MIP 54 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 Gene3D Glycerol uptake facilitator protein. 39 284 IPR023271 -
Chy09g00756 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 SUPERFAMILY Aquaporin-like 49 274 IPR023271 -
Chy09g00756 286 PANTHER AQUAPORIN TIP1-1 39 280 - -
Chy09g00756 286 Pfam Major intrinsic protein 47 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g00756 286 ProSitePatterns MIP family signature. 116 124 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00880 Chy-Chr8:16189217 Chy09g00756 Chy-Chr9:10013912 8.07E-100 dispersed
Chy09g00756 Chy-Chr9:10013912 Chy12g01348 Chy-Chr12:17763468 4.70E-93 dispersed
Chy09g00756 Chy-Chr9:10013912 Chy04g02024 Chy-Chr4:25910361 1.72E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00756 K09873 - csv:101222909 487.648