Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00780 ATGGCCGGTAAAGGAGAAGGTCCGGCGATCGGAATCGATCTTGGAACCACCTACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATTGCCAACGACCAGGGTAACAGGACCACGCCGTCGTATGTTGCTTTCACCGACTCTGAGCGCTTGATCGGTGATGCAGCTAAGAATCAGGTCGCCATGAACCCGATTAACACCGTTTTTGATGCTAAGCGTTTAATTGGCCGAAGATTTAGCGATTCATCGGTCCAGAGTGATATCAAGCTCTGGCCGTTTAAAGTTATTGCCGGTCCTAGCGATAAGCCAATGATTGTCGTAAACTACAAGGGTGAGGAGAAGCAGTTCTCTGCTGAAGAAATCTCTTCTATGGTGCTCATAAAGATGAAGGAGATTGCTGAGGCGTATCTCGGCACAACAGTGAAGAATGCCGTCGTCACCGTACCGGCTTACTTCAACGATTCTCAGAGACAGGCCACCAAGGATGCTGGTGTCATTTCCGGCCTAAATGTGATGCGTATTATCAATGAACCAACAGCTGCCGCCATTGCTTATGGTCTTGACAAGAAGTCAAGCAGCTCTGGCGAAAAGAACGTTCTAATTTTCGATTTGGGTGGTGGTACTTTTGATGTTTCATTGCTTACAATCGAAGAAGGTATTTTTGAGGTGAAGTCAACTGCCGGAGACACTCATCTGGGTGGTGAAGATTTTGACAACAGATTGGTTAACCATTTCGTGCAAGAATTCAAGAGAAAGAACAAGAAAGACATTAGTGGAAACCCCAGAGCCCTAAGAAGATTGAGAACCGCTTGTGAAAGGGCGAAGAGGACACTTTCCTCCACAGCTCAAACTACAATTGAGATTGATTCTCTTTACGAAGGAATTGACTTCTATTCAACCATTACTCGTGCTAGATTTGAAGAACTCAATATGGATCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGTTTGAGAGATGCCAAGATGGATAAAAGCACTGTACATGATGTTGTTCTTGTTGGTGGTTCTACTAGGATTCCTAAAGTGCAGCAATTGTTGCAAGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATTAATCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTTCAAGCTGCCATTTTGAGTGGTGAGGGTAATGAGAAGGTTCAAGATCTTTTGCTCTTGGATGTTACCCCTCTTTCCCTCGGCCTCGAAACAGCCGGTGGTGTGATGACTGTCTTAATTCCAAGGAATACCACCATCCCCACCAAGAAAGAACAAGTTTTCTCTACATATTCCGACAATCAGCCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGAGCAAGAACCCGCGACAACAACTTGCTTGGAAAATTCGAGCTCTCTGGAATCCCTCCAGCTCCAAGAGGTGTTCCTCAGATTACAGTTTGCTTTGACATCGATGCCAACGGTATTCTCAACGTCTCTGCCGAGGATAAAACCACTGGTCAGAAGAACAAGATCACAATCACGAATGACAAGGGGCGGTTGTCGAAGGAAGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCCGATGACGAGGAGCACAAGAAGAAGGTTGAAGCGAAGAACTCCTTGGAAAACTATGCTTATAACATGAGGAACACTGTGAGGGATGAGAAGTTCAGCTCCAAATTGGATCCGGCAGACAAGAAGAAGATTGAGGATGCCATTGAACAGGCAGTCCAATGGCTTGACAACAACCAACTTGCTGAAGCTGATGAGTTCGAAGACAAAATGAAGGAGCTTGAGAGCATTTGCAACCCCATCGTTGCTAAGATGTATCAAGGTGCTGGAGGACCTGGCATGGGCGGCGGTGCTATGGATGACGATGATGTTCCTCCTCCATCCGGCGGCAGTGGCGCGGGTCCTAAGATTGAAGAAGTTGATTAA 1959 46.09 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAVQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGGAMDDDDVPPPSGGSGAGPKIEEVD* 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10460270 10462644 + Chy9G164960.1 Chy09g00780 233677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00780 652 Gene3D - 10 384 - -
Chy09g00780 652 Coils Coil 576 596 - -
Chy09g00780 652 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Chy09g00780 652 Gene3D - 71 126 - -
Chy09g00780 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Chy09g00780 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Chy09g00780 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Chy09g00780 652 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Chy09g00780 652 Coils Coil 521 541 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Chy09g00780 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Chy09g00780 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Chy09g00780 652 MobiDBLite consensus disorder prediction 618 652 - -
Chy09g00780 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Chy09g00780 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 625 IPR029048 -
Chy09g00780 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Chy09g00780 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Chy09g00780 652 Gene3D - 545 619 IPR029048 -
Chy09g00780 652 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 629 - -
Chy09g00780 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Chy09g00780 652 Gene3D - 192 366 - -
Chy09g00780 652 PANTHER HEAT SHOCK PROTEIN 70KDA 1 629 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00585 Chy-Chr6:3985127 Chy09g00780 Chy-Chr9:10460270 4.74E-90 dispersed
Chy09g00780 Chy-Chr9:10460270 Chy09g01301 Chy-Chr9:14964326 0 dispersed
Chy09g00790 Chy-Chr9:10605959 Chy09g00780 Chy-Chr9:10460270 6.43E-45 dispersed
Chy09g00780 Chy-Chr9:10460270 Chy09g00789 Chy-Chr9:10603849 0 proximal
Chy01g01241 Chy-Chr1:15211938 Chy09g00780 Chy-Chr9:10460270 4.43E-178 transposed
Chy01g02060 Chy-Chr1:25439782 Chy09g00780 Chy-Chr9:10460270 3.23E-87 transposed
Chy05g00833 Chy-Chr5:11946746 Chy09g00780 Chy-Chr9:10460270 0 transposed
Chy07g00514 Chy-Chr7:4143119 Chy09g00780 Chy-Chr9:10460270 1.70E-64 transposed
Chy07g01759 Chy-Chr7:21201406 Chy09g00780 Chy-Chr9:10460270 0 transposed
Chy08g00209 Chy-Chr8:4897912 Chy09g00780 Chy-Chr9:10460270 4.88E-26 transposed
Chy08g00766 Chy-Chr8:15354481 Chy09g00780 Chy-Chr9:10460270 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00780 K03283 - csv:101210925 1229.93