Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00789 ATGTCGCATTCTAGCCGAGTTAATCGTCGTTATTCGTATCAATGTATTGTGTCTTCTAGAACGCTGTATTTTAATTATCTGTGGACGACGTTTTTGTTCGTGTCATTGTGTTCTGTTTACAAGACGCTAAATTGTTGTTTTCGTTTACGATCAATAGATGCGAAGAGGTTGATTGGAAGGAGATTCTCCGATCCTTCGGTCCAGAGCGATATGAAATTATGGCCATTCAAGGTGATCCCCGGTCCAGGGGACAAGCCTATGATCGTCGTCAATTACAAAGGCGAAGAGAAGCAATTTGCAGCTGAGGAAATCTCATCCATGGTCCTTACTAAAATGCGTGAGATTGCAGAAGCCTACCTTGGTTCCTCCGTGAAGAACGCCGTTGTCACCGTTCCTGCTTACTTCAATGACTCTCAACGTCAAGCCACCAAGGACGCCGGAGTCATCGCCGGTCTTAATGTTATGCGTATCATCAACGAGCCTACAGCTGCAGCCATTGCTTATGGACTCGACAAAAAGGCAACCAGCGTTGGCGAGAAGAATGTTCTGATTTTCGATCTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATCGAGGAAGGAATTTTCGAGGTGAAGGCAACCGCCGGTGACACCCATCTCGGCGGTGAGGATTTCGACAACAGATTAGTTAACCATTTCGTTCAGGAATTCAAGAGGAAGCATAAGAAAGACATCAGTGGAAATCCAAGGGCCCTCAGGAGATTGAGAACTGCTTGTGAAAGAGCCAAGAGAACCCTTTCATCTACTGCCCAAACAACAATCGAAATCGATTCTTTATACGAAGGAATCGATTTCTACACAACTATTACTCGTGCTAGATTCGAAGAACTCAACATGGATCTCTTCCGAAAGTGTATGGAGCCAGTTGAGAAATGTTTGAGAGATGCAAAGATGGACAAAAGCTCCGTCCATGATGTTGTTCTTGTAGGTGGTTCTACAAGAATCCCAAAGGTACAACAGCTATTGCAAGATTTCTTCAATGGCAAGGAGCTTTGCAAGAGTATCAACCCTGATGAGGCAGTTGCTTATGGAGCTGCTGTTCAAGCCGCCATCTTGAGTGGTGAAGGAAACGAGAAAGTGCAAGACCTTCTTCTTTTGGATGTTACTCCTCTATCTCTTGGTTTAGAAACTGCAGGAGGTGTAATGACGGTTTTGATTCCAAGGAACACGACGATCCCGACGAAGAAAGAGCAAGTTTTCTCTACTTACTCAGACAACCAACCTGGTGTTCTTATCCAAGTCTACGAGGGAGAAAGAACAAGAACAAAAGACAACAACTTGTTGGGTAAATTTGAACTTTCAGGCATTCCTCCAGCTCCTAGAGGCGTTCCTCAAATCACTGTTTGCTTCGACATCGACGCAAACGGTATCCTTAATGTATCGGCCGAGGATAAAACCACCGGACAAAAGAACAAGATCACAATTACCAACGACAAAGGAAGGTTGTCGAAAGAAGAGATAGAGAAATTGGTTCAAGAAGCAGAGAAATTCAAGGCAGAGGACGAAGAACACAAGAAGAAAGTTGAATCCAAGAATGCCTTAGAAAACTATGCTTACAATATGAGGAACACAATCAGAGATGAAAAGATTGGCGGTAAGCTTGCTCCGGCTGATAAGAAGAAGATTGAAGATGCAGTTGAACAAGCAATTCAGTGGCTAGATAGCAATCAGCTGGCTGAATCGGATGAATTTGAAGACAAGATGAAGGAACTCGAGTCAATTTGCAACCCCATCATAGCCAAGATGTATCAGGGCGGTGCCGACATGGGCGGTGCTGCCATGAATGATGATGCTCCTCCTTCTGGTGGTAGTGGCGCTGGTCCTAAGATTGAAGAAGTGGATTAA 1890 44.5 MSHSSRVNRRYSYQCIVSSRTLYFNYLWTTFLFVSLCSVYKTLNCCFRLRSIDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFEDKMKELESICNPIIAKMYQGGADMGGAAMNDDAPPSGGSGAGPKIEEVD* 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10603849 10605738 - Chy9G165050.1 Chy09g00789 233686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00789 629 Pfam Hsp70 protein 52 599 IPR013126 GO:0005524|GO:0140662
Chy09g00789 629 Coils Coil 495 522 - -
Chy09g00789 629 Gene3D - 527 600 IPR029048 -
Chy09g00789 629 Gene3D Actin; Chain A, domain 4 216 299 - -
Chy09g00789 629 PANTHER HEAT SHOCK PROTEIN 70KDA 52 609 IPR013126 GO:0005524|GO:0140662
Chy09g00789 629 SUPERFAMILY Actin-like ATPase domain 179 369 IPR043129 -
Chy09g00789 629 ProSitePatterns Heat shock hsp70 proteins family signature 3. 321 335 IPR018181 -
Chy09g00789 629 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 524 604 IPR029048 -
Chy09g00789 629 Gene3D - 108 365 - -
Chy09g00789 629 Gene3D - 53 107 - -
Chy09g00789 629 MobiDBLite consensus disorder prediction 602 629 - -
Chy09g00789 629 SUPERFAMILY Actin-like ATPase domain 52 172 IPR043129 -
Chy09g00789 629 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 373 530 IPR029047 -
Chy09g00789 629 PRINTS 70kDa heat shock protein signature 190 200 - -
Chy09g00789 629 PRINTS 70kDa heat shock protein signature 377 396 - -
Chy09g00789 629 PRINTS 70kDa heat shock protein signature 458 474 - -
Chy09g00789 629 PRINTS 70kDa heat shock protein signature 127 147 - -
Chy09g00789 629 PRINTS 70kDa heat shock protein signature 318 334 - -
Chy09g00789 629 PRINTS 70kDa heat shock protein signature 350 370 - -
Chy09g00789 629 Gene3D - 173 347 - -
Chy09g00789 629 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 52 609 - -
Chy09g00789 629 ProSitePatterns Heat shock hsp70 proteins family signature 2. 184 197 IPR018181 -
Chy09g00789 629 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 372 526 IPR029047 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00766 Chy-Chr8:15354481 Chy09g00789 Chy-Chr9:10603849 0 dispersed
Chy09g00789 Chy-Chr9:10603849 Chy09g01301 Chy-Chr9:14964326 0 dispersed
Chy09g00780 Chy-Chr9:10460270 Chy09g00789 Chy-Chr9:10603849 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00789 K03283 - csv:101211905 1105.12