Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g00791 | ATGGTTTTCTCTTCAGTTCCTGTGTTCCTTGATCCACCCAATTGGCCTTCTCAGCAACCAAATCAGCTCCAAGTAAGTGGTTGTGAGACCAATAATGCTCAACACCTTCCACCTCCGGCACCGTCAGCTAATAGTGGCGGTGGTGGAGGTGGTGGAGGAGGCGGTGGAGGTGGACCTGGATCAATTAGACCAGGGTCAATGACGGATCGAGCTAGGTTAGCAAAGATACCGCAACCAGAAGCAGGATTAAAGTGTCCTAGATGTGAATCAACAAACACGAAGTTTTGTTACTTCAACAACTATAGTCTCACTCAGCCTCGCCACTTTTGCAAGACGTGCCGCCGGTATTGGACGAGAGGTGGAGCGATGAGGAACGTACCGGTCGGAGGCGGGTGTCGGCGGTCTAGTAAGAGAAGTAGCAAAGGAGGAAGCAATAATAGGTCAAAATCACCAGGAGGATCAAGCACTTCAACAAGCACAGTATCATCAAATAGTTGTACAACAGATATAATTAGCCAACAATTAGCTCATCATCATCATCCTCCTCCAACAACCCATTTGCCCTTTTTCTCTCAAAATTTACACCATCTTAGTGAATTTGGAAACCTTGGTTTAAATTTTGAAGCCCTTCAAATTCCTAATTCACTCCCATCATCAGCTGAATCATCCTCAGTTTTATCAAGTGGAATTATTTCAGATCATCATCCATGGAAAATACCTTTTTTTGGAAATTTACATCAACAAAATGGGATTTATTCAAACTTCATGGCTGATCAAGATCATCATCATCAACAACAAACAGCTGATTTCACAAATTATCAAAGGTTGTCAAAGCCATTGTTGGAAAGTGGATTCAATCACCAATTGGAGAATATTAATATCAATAACAATAACAATAGCATGAAAATCTTGGAGGATACACAAGGGATTAACAATTTGTCAAGAAATTTTCTTGGAATTCAGCCAAATGAAGATCAATTCTGGAATTCTACAACAACAACAACAACAGCTGGAAATATTGGATGGAGTAGTGATCAAATTTCAGATCATTTCAACACAACTTCTTCCACTACTCATCTTTTGTAA | 1086 | 40.7 | MVFSSVPVFLDPPNWPSQQPNQLQVSGCETNNAQHLPPPAPSANSGGGGGGGGGGGGGPGSIRPGSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSKGGSNNRSKSPGGSSTSTSTVSSNSCTTDIISQQLAHHHHPPPTTHLPFFSQNLHHLSEFGNLGLNFEALQIPNSLPSSAESSSVLSSGIISDHHPWKIPFFGNLHQQNGIYSNFMADQDHHHQQQTADFTNYQRLSKPLLESGFNHQLENININNNNNSMKILEDTQGINNLSRNFLGIQPNEDQFWNSTTTTTTAGNIGWSSDQISDHFNTTSSTTHLL* | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10623346 | 10624619 | + | Chy9G165070.1 | Chy09g00791 | 233688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g00791 | 361 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 6 | 335 | IPR045174 | GO:0003700|GO:0006355 | |
Chy09g00791 | 361 | Pfam | Dof domain, zinc finger | 83 | 137 | IPR003851 | GO:0003677|GO:0006355 | |
Chy09g00791 | 361 | PANTHER | DOF DOMAIN ZINC FINGER PROTEIN | 6 | 335 | - | - | |
Chy09g00791 | 361 | ProSiteProfiles | Zinc finger Dof-type profile. | 83 | 137 | IPR003851 | GO:0003677|GO:0006355 | |
Chy09g00791 | 361 | MobiDBLite | consensus disorder prediction | 137 | 164 | - | - | |
Chy09g00791 | 361 | ProSitePatterns | Zinc finger Dof-type signature. | 85 | 121 | IPR003851 | GO:0003677|GO:0006355 | |
Chy09g00791 | 361 | MobiDBLite | consensus disorder prediction | 29 | 67 | - | - | |
Chy09g00791 | 361 | MobiDBLite | consensus disorder prediction | 124 | 164 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g02140 | Chy-Chr4:26625024 | Chy09g00791 | Chy-Chr9:10623346 | 3.23E-51 | dispersed | |
Chy09g00791 | Chy-Chr9:10623346 | Chy12g00184 | Chy-Chr12:2228183 | 5.25E-51 | dispersed | |
Chy09g00791 | Chy-Chr9:10623346 | Chy10g00546 | Chy-Chr10:12087430 | 7.32E-60 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18487 | PF02701 | zf-Dof | 4.60E-31 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g00791 | - | - | csv:101212561 | 616.69 |