Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00791 ATGGTTTTCTCTTCAGTTCCTGTGTTCCTTGATCCACCCAATTGGCCTTCTCAGCAACCAAATCAGCTCCAAGTAAGTGGTTGTGAGACCAATAATGCTCAACACCTTCCACCTCCGGCACCGTCAGCTAATAGTGGCGGTGGTGGAGGTGGTGGAGGAGGCGGTGGAGGTGGACCTGGATCAATTAGACCAGGGTCAATGACGGATCGAGCTAGGTTAGCAAAGATACCGCAACCAGAAGCAGGATTAAAGTGTCCTAGATGTGAATCAACAAACACGAAGTTTTGTTACTTCAACAACTATAGTCTCACTCAGCCTCGCCACTTTTGCAAGACGTGCCGCCGGTATTGGACGAGAGGTGGAGCGATGAGGAACGTACCGGTCGGAGGCGGGTGTCGGCGGTCTAGTAAGAGAAGTAGCAAAGGAGGAAGCAATAATAGGTCAAAATCACCAGGAGGATCAAGCACTTCAACAAGCACAGTATCATCAAATAGTTGTACAACAGATATAATTAGCCAACAATTAGCTCATCATCATCATCCTCCTCCAACAACCCATTTGCCCTTTTTCTCTCAAAATTTACACCATCTTAGTGAATTTGGAAACCTTGGTTTAAATTTTGAAGCCCTTCAAATTCCTAATTCACTCCCATCATCAGCTGAATCATCCTCAGTTTTATCAAGTGGAATTATTTCAGATCATCATCCATGGAAAATACCTTTTTTTGGAAATTTACATCAACAAAATGGGATTTATTCAAACTTCATGGCTGATCAAGATCATCATCATCAACAACAAACAGCTGATTTCACAAATTATCAAAGGTTGTCAAAGCCATTGTTGGAAAGTGGATTCAATCACCAATTGGAGAATATTAATATCAATAACAATAACAATAGCATGAAAATCTTGGAGGATACACAAGGGATTAACAATTTGTCAAGAAATTTTCTTGGAATTCAGCCAAATGAAGATCAATTCTGGAATTCTACAACAACAACAACAACAGCTGGAAATATTGGATGGAGTAGTGATCAAATTTCAGATCATTTCAACACAACTTCTTCCACTACTCATCTTTTGTAA 1086 40.7 MVFSSVPVFLDPPNWPSQQPNQLQVSGCETNNAQHLPPPAPSANSGGGGGGGGGGGGGPGSIRPGSMTDRARLAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSKGGSNNRSKSPGGSSTSTSTVSSNSCTTDIISQQLAHHHHPPPTTHLPFFSQNLHHLSEFGNLGLNFEALQIPNSLPSSAESSSVLSSGIISDHHPWKIPFFGNLHQQNGIYSNFMADQDHHHQQQTADFTNYQRLSKPLLESGFNHQLENININNNNNSMKILEDTQGINNLSRNFLGIQPNEDQFWNSTTTTTTAGNIGWSSDQISDHFNTTSSTTHLL* 362
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 10623346 10624619 + Chy9G165070.1 Chy09g00791 233688
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00791 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 335 IPR045174 GO:0003700|GO:0006355
Chy09g00791 361 Pfam Dof domain, zinc finger 83 137 IPR003851 GO:0003677|GO:0006355
Chy09g00791 361 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 6 335 - -
Chy09g00791 361 ProSiteProfiles Zinc finger Dof-type profile. 83 137 IPR003851 GO:0003677|GO:0006355
Chy09g00791 361 MobiDBLite consensus disorder prediction 137 164 - -
Chy09g00791 361 ProSitePatterns Zinc finger Dof-type signature. 85 121 IPR003851 GO:0003677|GO:0006355
Chy09g00791 361 MobiDBLite consensus disorder prediction 29 67 - -
Chy09g00791 361 MobiDBLite consensus disorder prediction 124 164 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02140 Chy-Chr4:26625024 Chy09g00791 Chy-Chr9:10623346 3.23E-51 dispersed
Chy09g00791 Chy-Chr9:10623346 Chy12g00184 Chy-Chr12:2228183 5.25E-51 dispersed
Chy09g00791 Chy-Chr9:10623346 Chy10g00546 Chy-Chr10:12087430 7.32E-60 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18487 PF02701 zf-Dof 4.60E-31 No_clan Chy TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00791 - - csv:101212561 616.69