Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00840 ATGGCCGCCAACAAATTTGCCACCATCTTGCACAGAAACTCCAACAAAATCACCCTTATTTTAGTTTACGCTCTTCTTGAATGGGTTCTCATCTTTCTTCTTCTTCTTCATGGTCTTTTTTCTTACCTGATCGTTAAATTTGCAGAGTGGTTTGGGCTTAAGCGACCCTGTTTGTGGTGTTCTAGAGTCGACCATGTTTTCGAGCCTCAAAGAAAGCAGTCTTATAGAGATCTTCTTTGTGAAGGTCATGCTATGGAGATTTCTAATCTGGGCTACTGTTCGAATCATCGGAAACTGTCGGAGTTTCGAGATTTATGCGAGGATTGCTCGTCCTCTTCTAAGTCTAATGAGTTCTATCAGATTTCTAAGAGCTTTCCGTTTTTTGATGATGAGAAGGAGGATTTCAGGAGCTGTTCTTGCTGTGGGGAAACTTTGAAGAGTCGATTGTTTTCCCCTTGTATTTTGATTAAACCGAACTGGGGGGATTTGGATTATACCCAGAAAGAGAATTTGATTTCTGAAACGGAAACTGATGAAATTCATGTTTCTCAATCGGAAGATGTCAGCGGAAACAGAGGAATCTCCATTGTTTTCGGTGGGGAAGAGGGAGAGAAAAACTCCACTTGCTCTGTTTGTGGCTGTGGTTGTAAAGATTCAGCGGTTCACGAGGATGATGATGATGATAGAGCTGATATTAGTGCTGAAAAAGATGGGGATTTTCTTGAGCTGGCTGAAGATCTGACCATTTGCAATCAGAAAACAGTTCAAGTTGGTTGTGAGAAAGAGGATGAATTGCCTGAGACTGTTCCTAATCATCTTGAGTTCTACATTGATCGGGGCGATGATCGGCGGTTGATCCCAGTTGATTTGATCGATTTTTCGGCCCCTGATGACGATAATAGCACTAGCAACATCTTAAGCCAAGTGAAAGATGAGGAACAAGAACAAGAGGATTGTGGGAATGAAGATGTTGTTTTGGATTTTGCTTCAAATTTTGAGCATCGAAGGCATGGTGTGAGTGAAGCTTGGGAAGTTATTTCAGGAGAGAGACTGGCAGAGTTTCTCTCTGCTTCTCTTCACGAGAACAAGCAGCGAGTTGAAGAGGTGGAAGCCATGGATGTGGAGGAAGATCCATTAGTGGGAGTAGGAAAAAAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGCTGATGCTTCCATTGATGAATCAAGTCAAGCGCCAGCCAGTGATGCTCATAAAGAAGAACTCGAAGAGTTGGTGGTAGCGACAAGACAACCGGATTCAGATCTTCATGAAGATTTTCACATGTGGAATGATGAACTTGAAGTAGAGATTTCAATTGGCACTGATATTCCCGACCACGAACCGATTGATGAGATTCAAACTCAAATTGACCTTCCTCCGCATCCTGACTTACAAGAAGATCCTTCCCCAAGTTCATCATTGGATGTTGACAATATGCAAGATTCTAACATAGTCGAGGAAGTCGAGGAAGCCGAGGAAGTTATGGAAGAGGAAAAGTTCAAGATCTTTTCTATGGAAACGAGTTCTCAACCTTCAGACAATCACAAACCGTCGAGTTCTGAGGTTAATGAGGATGAGGAAGAAGATAAAGTTCCTGGTACAGAAGTGGAAGAGTTCAAGATCTTGTCCGTGGAAACGAGTTCTCATCCTTCAGACAATCACAAATCGTCGAGTTCTGAGGTCAATGAGAACGAGGAAGAAGATAAAGTTCCTGATACACCCACTTCAATGGATAGTCTCCACCAGCTACACAAGAAGCTGCTATTACTAGACAGAAAAGAATCTGGGACTGAAGAGTCTTTGGATGGAAGCGTCATAAGCGAGACCGAAGGTGGGGATGGTGTGTTGACCCTTGAGAAATTGAAGTCAGCGTTGAGAACCGAAAGAAAGGCTTTGAATGCTTTATATGCAGAGCTAGAAGAAGAGAGAAGTGCTTCGGCCATAGCAGCCAACCAAACAATGGCAATGATAAATAGGCTTCAAGAGGAGAAAGCAAGTATGCAAATGGAAGCTTTGCAGTATCAGAGAATGATGGAGGAGCAATCTGAGTATGATCAGGAAGCTTTGCAGCTTTTGAATGAGCTCGTAGTAAAGAGGGAAAAGGAAAAGCAAGAGCTCGAGAAAGAAATCGAAATTTACAGAAAAAAGCTTCAGGATTATGAAGCCAAAGAAAAAATTGCATTGTTAAGGAGCAGAAAAGAAGGGAGCATCCGTAGTAGAAATTCTTCAGTTTCTTGTAGCAATGCCGACGATAGCGATGGACTATCTATCGATTTGAACACTGAGGCAAAGAAAGATGAAGATTTGTTTTTGAACCAAGAAACAGAGAATCAAAACACCCCAGCTGAGGCAGTCCTTTATTTGGAGGAAACTTTGGCAAACTTTGAGGAAGAAAGGCTGTCCATTCTAGAGGAACTGAAGATGTTGGAAGAGAAGCTCTTCACCTTGAGTGATGAAGAACAACAATTTGAAGACATTGACCATTATTGTGAACGAAATGGGAATGGCTACCATAAGAACTCGGATTATTCTCCGGGAACAAATGGATTTGAAAATGGTCATAATGCCAAGGAAATGAATGGAAAACATTATCCAGAGAGGAGAGCAATGAGCACGAAAGCCAAAAGACTTCTCCCACTTTTCGATGATGTAGTCGATGCAGATGTTGTTGAAGATGTAACAAATGGAGAAGAACAAGGGTTCGACTCCATTTCTATCCAAAAATCTTTAGACAACAAATTCGACACAGAATTCAGGAGGGTTGCTGTTGAGGAAGAGGTCGATCATGTCTACGAGAGATTACAAGCACTCGAAGCAGATAGAGAATTTCTAAAGCATTGCATTGGCTCCCTAAGAAAAGGAGACAAAGGCTTAGAACTTCTCCAAGAAATCTTACAGCATCTCCGTGATCTAAGGAATGTTGATCTTCAGTTGAAGAACATGGGAGACAGTGTTGTAGCCTGA 2985 41.84 MAANKFATILHRNSNKITLILVYALLEWVLIFLLLLHGLFSYLIVKFAEWFGLKRPCLWCSRVDHVFEPQRKQSYRDLLCEGHAMEISNLGYCSNHRKLSEFRDLCEDCSSSSKSNEFYQISKSFPFFDDEKEDFRSCSCCGETLKSRLFSPCILIKPNWGDLDYTQKENLISETETDEIHVSQSEDVSGNRGISIVFGGEEGEKNSTCSVCGCGCKDSAVHEDDDDDRADISAEKDGDFLELAEDLTICNQKTVQVGCEKEDELPETVPNHLEFYIDRGDDRRLIPVDLIDFSAPDDDNSTSNILSQVKDEEQEQEDCGNEDVVLDFASNFEHRRHGVSEAWEVISGERLAEFLSASLHENKQRVEEVEAMDVEEDPLVGVGKKEEKEEEEEEADASIDESSQAPASDAHKEELEELVVATRQPDSDLHEDFHMWNDELEVEISIGTDIPDHEPIDEIQTQIDLPPHPDLQEDPSPSSSLDVDNMQDSNIVEEVEEAEEVMEEEKFKIFSMETSSQPSDNHKPSSSEVNEDEEEDKVPGTEVEEFKILSVETSSHPSDNHKSSSSEVNENEEEDKVPDTPTSMDSLHQLHKKLLLLDRKESGTEESLDGSVISETEGGDGVLTLEKLKSALRTERKALNALYAELEEERSASAIAANQTMAMINRLQEEKASMQMEALQYQRMMEEQSEYDQEALQLLNELVVKREKEKQELEKEIEIYRKKLQDYEAKEKIALLRSRKEGSIRSRNSSVSCSNADDSDGLSIDLNTEAKKDEDLFLNQETENQNTPAEAVLYLEETLANFEEERLSILEELKMLEEKLFTLSDEEQQFEDIDHYCERNGNGYHKNSDYSPGTNGFENGHNAKEMNGKHYPERRAMSTKAKRLLPLFDDVVDADVVEDVTNGEEQGFDSISIQKSLDNKFDTEFRRVAVEEEVDHVYERLQALEADREFLKHCIGSLRKGDKGLELLQEILQHLRDLRNVDLQLKNMGDSVVA* 995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11191864 11195066 - Chy9G165560.1 Chy09g00840 233737

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00840 994 Coils Coil 799 819 - -
Chy09g00840 994 Coils Coil 385 405 - -
Chy09g00840 994 Coils Coil 625 652 - -
Chy09g00840 994 Coils Coil 657 730 - -
Chy09g00840 994 PANTHER MYOSIN-BINDING PROTEIN 2 1 990 IPR039306 GO:0017022
Chy09g00840 994 MobiDBLite consensus disorder prediction 563 581 - -
Chy09g00840 994 PANTHER MYOSIN-BINDING PROTEIN 3 1 990 - -
Chy09g00840 994 Coils Coil 927 947 - -
Chy09g00840 994 MobiDBLite consensus disorder prediction 374 419 - -
Chy09g00840 994 Pfam Zein-binding 627 717 IPR007656 -
Chy09g00840 994 MobiDBLite consensus disorder prediction 445 585 - -
Chy09g00840 994 ProSiteProfiles GTD-binding domain profile. 623 721 IPR007656 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00840 - - - csv:101220314 1801.95
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01217 Chy-Chr5:16585638 Chy09g00840 Chy-Chr9:11191864 2.12E-17 dispersed
Chy06g00362 Chy-Chr6:2425505 Chy09g00840 Chy-Chr9:11191864 2.21E-18 dispersed
Chy07g01766 Chy-Chr7:21256552 Chy09g00840 Chy-Chr9:11191864 7.91E-13 dispersed
Chy09g00840 Chy-Chr9:11191864 Chy12g01308 Chy-Chr12:17491154 3.10E-21 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g461 . . . . . . . . . . . . . . . . Cpe01g01841 . . . . . . . . . . . . . . . . Cone6ag0387 Cone9ag0414 . Csa05g02013 . . . Blo11g00974 . . . . . . . . Cmo15g01004 . Cma15g00963 . Car15g00909 Cpe13g00361 . Bhi12g00920 . . . . . . Cla01g00620 Cam01g0648 Cec01g0640 Cco01g0666 Clacu01g0636 Cmu01g0609 Cre09g1892 Lsi09g00670 . Chy09g00840 Cme09g01372
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006446 1 3 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 2 1 1 1 1 2 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy09g00840 Chy_Chr09 FPKM 20.544716 17.15225 54.727409 50.650963 5.515724 9.732032 8.195372 3.371943 3.615656 7.21191