Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy09g00845 | ATGGAACACTTTTTAGGTCTTCTTCGAATTCGGGTGCTGCGCGGTGTTAATCTCGCTATTCGTGATACCCGTAGCAGCGATCCCTATGTCCTCGTCACCATGGGCGACCAGAGGCTGAAGACTCGCGTGGTGAAAAATAGTTGCAACCCTGAATGGAATGATGAGTTGACTCTTTCAGTTGCAGATCTCAGGACTCCGATTGGTTTATCAGTATATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATCGAACCATACATCGAGTGTTTGAGGATGGGACTACAGAGCCTCCCAGATGGTTGTGTGGTTAGGAGATTATATCCAAGCAGAACAAACTATTTAGCTGATGAGAGCCAATGTGTTTGGCAAAAGGGGAAAATTGTACAGAACATGATCTTGAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGCAGTTCAGCTCGAATGGATCGACGTCCCTGGTGCTAAGGGTTTGCCAGACGGAAGTACGAGCAACTTCTGA | 522 | 46.93 | MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVLVTMGDQRLKTRVVKNSCNPEWNDELTLSVADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLRMGLQSLPDGCVVRRLYPSRTNYLADESQCVWQKGKIVQNMILRLKNVECGEVAVQLEWIDVPGAKGLPDGSTSNF* | 174 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 11264366 | 11266140 | - | Chy9G165610.1 | Chy09g00845 | 233742 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy09g00845 | 173 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
| Chy09g00845 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Chy09g00845 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
| Chy09g00845 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 158 | IPR035892 | - | |
| Chy09g00845 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Chy09g00845 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 163 | - | - | |
| Chy09g00845 | 173 | Gene3D | C2 domain | 4 | 168 | IPR035892 | - | |
| Chy09g00845 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g02309 | Chy-Chr2:27116609 | Chy09g00845 | Chy-Chr9:11264366 | 8.22E-54 | dispersed | |
| Chy06g01325 | Chy-Chr6:12523606 | Chy09g00845 | Chy-Chr9:11264366 | 4.16E-57 | dispersed | |
| Chy09g00845 | Chy-Chr9:11264366 | Chy10g00229 | Chy-Chr10:5776523 | 5.18E-76 | dispersed | |
| Chy09g00845 | Chy-Chr9:11264366 | Chy12g01395 | Chy-Chr12:18082373 | 2.04E-72 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy09g00845 | - | - | csv:101204404 | 337.806 |