Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00845 ATGGAACACTTTTTAGGTCTTCTTCGAATTCGGGTGCTGCGCGGTGTTAATCTCGCTATTCGTGATACCCGTAGCAGCGATCCCTATGTCCTCGTCACCATGGGCGACCAGAGGCTGAAGACTCGCGTGGTGAAAAATAGTTGCAACCCTGAATGGAATGATGAGTTGACTCTTTCAGTTGCAGATCTCAGGACTCCGATTGGTTTATCAGTATATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATCGAACCATACATCGAGTGTTTGAGGATGGGACTACAGAGCCTCCCAGATGGTTGTGTGGTTAGGAGATTATATCCAAGCAGAACAAACTATTTAGCTGATGAGAGCCAATGTGTTTGGCAAAAGGGGAAAATTGTACAGAACATGATCTTGAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGCAGTTCAGCTCGAATGGATCGACGTCCCTGGTGCTAAGGGTTTGCCAGACGGAAGTACGAGCAACTTCTGA 522 46.93 MEHFLGLLRIRVLRGVNLAIRDTRSSDPYVLVTMGDQRLKTRVVKNSCNPEWNDELTLSVADLRTPIGLSVYDKDTLTDHDKMGDAEIDIEPYIECLRMGLQSLPDGCVVRRLYPSRTNYLADESQCVWQKGKIVQNMILRLKNVECGEVAVQLEWIDVPGAKGLPDGSTSNF* 174
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 11264366 11266140 - Chy9G165610.1 Chy09g00845 233742
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00845 173 CDD C2_ArfGAP 5 148 - -
Chy09g00845 173 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Chy09g00845 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Chy09g00845 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Chy09g00845 173 SMART C2_3c 7 102 IPR000008 -
Chy09g00845 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Chy09g00845 173 Gene3D C2 domain 4 168 IPR035892 -
Chy09g00845 173 Pfam C2 domain 6 92 IPR000008 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02309 Chy-Chr2:27116609 Chy09g00845 Chy-Chr9:11264366 8.22E-54 dispersed
Chy06g01325 Chy-Chr6:12523606 Chy09g00845 Chy-Chr9:11264366 4.16E-57 dispersed
Chy09g00845 Chy-Chr9:11264366 Chy10g00229 Chy-Chr10:5776523 5.18E-76 dispersed
Chy09g00845 Chy-Chr9:11264366 Chy12g01395 Chy-Chr12:18082373 2.04E-72 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00845 - - csv:101204404 337.806