Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00887 ATGCTTGTGGGTCTGTTTCTCATTCTTTTGTGCTGTTCTGATTGTCTTCTTCTTGTGAGCTCTTTGAATGATGAAGGGTTTGTGCTTTTAACACTTAAACAGTCCATTTCTCTAGACCCAGATGGGGCTTTTAGCAATTGGGATTCTTCTAATGAAACCCCTTGTTCTTGGAATGGGGTTGGTTGTCTAAATGATATTGTTGTTTCTGTTACCATTACTAAGAGGAATTTGTATGGATTTCTTCCTTCTTCTCTTGGTGCTCTTTCTGGGCTTCGCCATTTGAATTTAAGAAACAACAGGCTTTTTGGGAGTTTACCTTTTCAGCTCTTCTCTGCTCAAGCTCTACAGAGCTTGGTTCTTTATGGGAATTCCTTTTCTGGATTTGTTCCAAATGGGATTGGGAAGCTTAAATACCTTCAAACTTTGGATTTATCTCAAAATTTATTCAATGGGTCATTGCCGGCTTCAATTATACAATGCAGTAGACTTAAAACCCTTGATGTTAGTCACAATAACTTCACTGGTTCACTACCACATGGGTTTGGAACTAGTTTTAGTTCTTTGGAGAAACTGGATCTTTCATTTAACACATTTGATGGTTCCCTTCCTAGTGATTTGGGGAATTTGTCTAGTTTACAGGGCACTTTTGACTTATCTCATAATCTTTTTTCTGGTTCAATTCCATCTAGCCTTGGAAACCTACCTGAAAAGGTTTACATTGATCTCAGCCATAACAATTTGAGTGGTCCAATACCTCAAAATGGTGCTCTGATGAACAGAGGACCCACTGCTTTTATTGGTAATCCTGGGCTCTGTGGTTCCCCATTGAAGAGCACATGTTCTTCAGGAACTCTGAGTGCAAGCTCACCGTCCTTGCTTCCCTTTCTCCCAGACGATCACTCACCAGGGATTTCTGGCGTCTATGCTGAGAAAACCAGGGGATTGAGTAAGAGTGCTGTGATTGCAATAGTACTTGGTGATGTGGTTGGTATATGTTTGGTTGGGTTATTGTTCTCATATTGTTATTCTAGAGCATGTTATCCAAGGAGCAAAGACAAAATGGGGCATAATTCTGATAAGGGGAAAGGAAGAAATGAGTGTTTATGCTTCAGGAAGGATGAATCTGAGTCGGTTTCACAGAATGTGGAGCAGTATGATCTTGTGCCATTGGATGCACAAGTAGGATTTGATCTTGATGAACTTCTCAAGGCATCAGCCTTTGTTATTGGCAAAAGTGGGATTGGTATAGTATACAAAGTGGTACTTGAAGATGGAGTTACATTGGCCGTGCGACGATTGGGCGAAGGCGGTTCACAAAGGTTCAAAGAATTTCAAACAGAAGTAGAAGCAATAGCAAAGCTAAGGCATTACAATCTTGTCACTCTTAGAGCCTATTATTGGTCTGTTGATGAGAAACTGCTCATTTATGAATTCATACCCAATGGAAACCTTGCCACTGCCATTCATGGAAAGCCAGGAACGGTATCTTTCACGCCGTTATCCTGGTCTGCTAGATTAAAGATCATGGAAGGAATTGCTAAAGGAATTGTCTATCTCCATGAATTCAGCCCCAAGAAGTATGTTCATGGAGATTTGAAACCCAACAACATACTGCTTACTCAAAACATGGAAGCCAAAATTTCTGACTTCGGCCTTGCTCGACTTGCGAATATTGCAGGAGGAACCCCAACCTTACAATCAAGTCGAATGGCGTCCGAGAAACCATTAGATCCAAAACAACCAAGAACTGTAACATCCGAGATTATTTGTAGTTCATCTTCCAACACAGGAACTTGTTATCAAGCCCCTGAATCACTCAAAGTCTTAAAACCATCCCAAAAATGGGATGTTTACTCATATGGTATGATCTTACTTGAAATGATCACAGGAAGATTCCCATTAATCCAAGTGAGTTCTTCCTCTGAAATGGATCTTGTTCATTGGATTCAACTATGCATTGAAGAACAAAAGCCACTTTCAGAAGTAATAGATCCACATCTAATTCAAGATGCAGATAAAGAAGAAGAGTTCATCTCTATTCTCAAAATTGCTATGTCTTGTGTTCATGGAAGCCCTGAAAGGAGACCTACCATGAGACATGTTTCTGACGCCATTGAAAGGCTATTGTCTTCTTCATCATCATCGAGGAACTCAAAATGCACACCACAAAGAAAAGAGGAAGCAAAAGCGATGGGAAGTTTATGTATTGATTAA 2214 40.15 MLVGLFLILLCCSDCLLLVSSLNDEGFVLLTLKQSISLDPDGAFSNWDSSNETPCSWNGVGCLNDIVVSVTITKRNLYGFLPSSLGALSGLRHLNLRNNRLFGSLPFQLFSAQALQSLVLYGNSFSGFVPNGIGKLKYLQTLDLSQNLFNGSLPASIIQCSRLKTLDVSHNNFTGSLPHGFGTSFSSLEKLDLSFNTFDGSLPSDLGNLSSLQGTFDLSHNLFSGSIPSSLGNLPEKVYIDLSHNNLSGPIPQNGALMNRGPTAFIGNPGLCGSPLKSTCSSGTLSASSPSLLPFLPDDHSPGISGVYAEKTRGLSKSAVIAIVLGDVVGICLVGLLFSYCYSRACYPRSKDKMGHNSDKGKGRNECLCFRKDESESVSQNVEQYDLVPLDAQVGFDLDELLKASAFVIGKSGIGIVYKVVLEDGVTLAVRRLGEGGSQRFKEFQTEVEAIAKLRHYNLVTLRAYYWSVDEKLLIYEFIPNGNLATAIHGKPGTVSFTPLSWSARLKIMEGIAKGIVYLHEFSPKKYVHGDLKPNNILLTQNMEAKISDFGLARLANIAGGTPTLQSSRMASEKPLDPKQPRTVTSEIICSSSSNTGTCYQAPESLKVLKPSQKWDVYSYGMILLEMITGRFPLIQVSSSSEMDLVHWIQLCIEEQKPLSEVIDPHLIQDADKEEEFISILKIAMSCVHGSPERRPTMRHVSDAIERLLSSSSSSRNSKCTPQRKEEAKAMGSLCID* 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11643862 11646200 - Chy9G166030.1 Chy09g00887 233784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00887 737 Pfam Leucine Rich repeat 159 175 IPR001611 GO:0005515
Chy09g00887 737 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 711 - -
Chy09g00887 737 SMART LRR_typ_2 88 112 IPR003591 -
Chy09g00887 737 SMART LRR_typ_2 185 209 IPR003591 -
Chy09g00887 737 SMART LRR_typ_2 136 160 IPR003591 -
Chy09g00887 737 CDD STKc_IRAK 409 708 - -
Chy09g00887 737 MobiDBLite consensus disorder prediction 710 737 - -
Chy09g00887 737 Gene3D Transferase(Phosphotransferase) domain 1 479 731 - -
Chy09g00887 737 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515
Chy09g00887 737 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Chy09g00887 737 SUPERFAMILY L domain-like 23 277 - -
Chy09g00887 737 SUPERFAMILY Protein kinase-like (PK-like) 408 703 IPR011009 -
Chy09g00887 737 ProSiteProfiles Protein kinase domain profile. 403 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00887 737 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Chy09g00887 737 SMART serkin_6 407 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00887 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Chy09g00887 737 Gene3D Phosphorylase Kinase; domain 1 371 478 - -
Chy09g00887 737 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 711 - -
Chy09g00887 737 Gene3D Ribonuclease Inhibitor 182 266 IPR032675 -
Chy09g00887 737 Pfam Protein kinase domain 409 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy09g00887 Chy10g01174 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00887 Chy-Chr9:11643862 Chy11g00555 Chy-Chr11:6176636 1.15E-138 dispersed
Chy10g00792 Chy-Chr10:13971417 Chy09g00887 Chy-Chr9:11643862 0 transposed
Chy12g01179 Chy-Chr12:16636560 Chy09g00887 Chy-Chr9:11643862 6.85E-47 transposed
Chy10g01174 Chy-Chr10:16557729 Chy09g00887 Chy-Chr9:11643862 0 wgd
Chy03g00083 Chy-Chr3:850411 Chy09g00887 Chy-Chr9:11643862 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71471 PF00069 Pkinase 4.70E-34 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00887 - - csv:101203259 1350.11