Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00893 ATGAGTGGCGGTGCTGGTGGCACTTCTCGAAGCACTAGGGATTTGATCTGCAACGCCGGTGCCGGTGCTGCTGCAGGTTCTATAGCAGCTACGTTCGTCTGCCCTTTAGATGTCATCAAGACGAGGCTGCAAGTGCATGGTCTTCCTTCTGGTCAAAGTGGAGGTAGTATCATCATCACTAGCCTACAAGGCATAATGCGTTCTGAAGGTTTCAGGGGAATGTATCGTGGCCTTTCTCCAACAATAGTAGCACTTCTTCCAAACTGGGCTGTCTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTTCATTCAGATGGGGACGATGGTCATCAACTCTCGTTTGGGGCAAATATGCTTGCTGCTGCTGGGGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACCCGACTCCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGCATGGTTTCAGCATTTACCAGGATCGTACGTGAAGAAGGAATTCGTGGGCTTTATAGTGGTATCATCCCTTCATTGGTTGGGATAAGTCATGTTGCAATTCAATTTCCTGCATATGAAAGGCTCAAATCGTATATTGCAAAAAGAGATAACACAACCGTTGATAAACTAAGTCCAGGACATTTAGCTATTGCCTCCTCATTGTCGAAAGTTACGGCCTCGGTAATGACTTACCCACATGAGGTAGTTCGTTCCCGGCTACAAGAGCAAGGCCAAGCCAGAAATATTGCTCCTCAATACTCAGGAGTAATGGACTGTATCAAAAAGGTTTTTCGAAAGGAAGGTGTCCCAGGTTTTTATAGAGGTTGTGCGACAAATCTGTTGCGAACAACTCCATCTGCTGTAATAACTTTCACCAGCTATGAAATGATACATCGGTTCCTACTGCGAGCTATACCTTCTGGCGAGGATAAATATTCAGAAACCCATCCGAACTCCGATAGCAATAGTCATGTGAAGCCCCAAATGGCGAACATAGACAATGCAAACGAAGATAGTGATTCCGACATACAACAATCACAATCCCAATCAAGTAAGCAAACTAGTTTTCCTCTGGGGAATAAAGAACGCTTAACATCTAGACATTGA 1116 45.34 MSGGAGGTSRSTRDLICNAGAGAAAGSIAATFVCPLDVIKTRLQVHGLPSGQSGGSIIITSLQGIMRSEGFRGMYRGLSPTIVALLPNWAVYFTVYEHLKGLLHSDGDDGHQLSFGANMLAAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIVREEGIRGLYSGIIPSLVGISHVAIQFPAYERLKSYIAKRDNTTVDKLSPGHLAIASSLSKVTASVMTYPHEVVRSRLQEQGQARNIAPQYSGVMDCIKKVFRKEGVPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRAIPSGEDKYSETHPNSDSNSHVKPQMANIDNANEDSDSDIQQSQSQSSKQTSFPLGNKERLTSRH* 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11700638 11704109 - Chy9G166090.1 Chy09g00893 233790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00893 371 MobiDBLite consensus disorder prediction 321 364 - -
Chy09g00893 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Chy09g00893 371 MobiDBLite consensus disorder prediction 313 371 - -
Chy09g00893 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 102 IPR018108 -
Chy09g00893 371 Pfam Mitochondrial carrier protein 214 305 IPR018108 -
Chy09g00893 371 Pfam Mitochondrial carrier protein 18 105 IPR018108 -
Chy09g00893 371 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Chy09g00893 371 Gene3D Mitochondrial carrier domain 5 108 IPR023395 -
Chy09g00893 371 Gene3D Mitochondrial carrier domain 109 310 IPR023395 -
Chy09g00893 371 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Chy09g00893 371 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Chy09g00893 371 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Chy09g00893 371 PRINTS Mitochondrial carrier protein signature 18 31 IPR002067 GO:0055085
Chy09g00893 371 PRINTS Mitochondrial carrier protein signature 175 193 IPR002067 GO:0055085
Chy09g00893 371 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Chy09g00893 371 SUPERFAMILY Mitochondrial carrier 14 299 IPR023395 -
Chy09g00893 371 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 10 313 - -
Chy09g00893 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Chy09g00893 371 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 313 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01724 Chy-Chr1:23024676 Chy09g00893 Chy-Chr9:11700638 1.26E-131 dispersed
Chy02g00609 Chy-Chr2:3701280 Chy09g00893 Chy-Chr9:11700638 1.18E-49 dispersed
Chy09g00893 Chy-Chr9:11700638 Chy06g00134 Chy-Chr6:871321 8.24E-15 dispersed
Chy10g00445 Chy-Chr10:10570670 Chy09g00893 Chy-Chr9:11700638 1.78E-27 dispersed
Chy09g00893 Chy-Chr9:11700638 Chy03g01130 Chy-Chr3:14566422 7.30E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00893 K15115 - csv:101216902 671.389